RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 TBCAO75347 108 aaKnown RBP16.45■□□□□ 0.22
UBXN4-203ENST00000416538 ABLIM3O94929 683 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 SEC24AO95486 1093 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 VNN2O95498 520 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 KRT18P05783 430 aaKnown RBP16.45■□□□□ 0.22
UBXN4-203ENST00000416538 NFICP08651 508 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 POU2F2P09086 479 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 FSHRP23945 695 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 LRPAP1P30533 357 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 RPL9P32969 192 aaKnown RBP16.45■□□□□ 0.22
UBXN4-203ENST00000416538 DDIT3P35638 169 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 AARSP49588 968 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBXN4-203ENST00000416538 SLC44A3Q8N4M1 653 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 FGF13Q92913 245 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 FGF14Q92915 247 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 KIF12Q96FN5 646 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 STK17AQ9UEE5 414 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 KCNG1Q9UIX4 513 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 CPSF3Q9UKF6 684 aaKnown RBP16.45■□□□□ 0.22
UBXN4-203ENST00000416538 POLIQ9UNA4 740 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 NUB1Q9Y5A7 615 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 NUMBLQ9Y6R0 609 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 MORC2Q9Y6X9 1032 aaPredicted RBP16.45■□□□□ 0.22
UBXN4-203ENST00000416538 TICRRQ7Z2Z1 1910 aa16.45■□□□□ 0.22
UBXN4-203ENST00000416538 PI15O43692 258 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 STX6O43752 255 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 CFHP08603 1231 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 NASPP49321 788 aaPredicted RBP16.44■□□□□ 0.22
UBXN4-203ENST00000416538 MRE11P49959 708 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 CASP5P51878 434 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 WNT7BP56706 349 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 PPP2R3AQ06190 1150 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 KCNA1Q09470 495 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 JADE1Q6IE81 842 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 PARM1Q6UWI2 310 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 NPAS3Q8IXF0 933 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 SIX5Q8N196 739 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 ZSWIM2Q8NEG5 633 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 ING5Q8WYH8 240 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 DDX12PQ92771 950 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 MSTO1Q9BUK6 570 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 STRA6Q9BX79 667 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 ST6GALNAC4Q9H4F1 302 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 PLEKHA5Q9HAU0 1116 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.44■□□□□ 0.22
UBXN4-203ENST00000416538 CDH7Q9ULB5 785 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 TIMM13Q9Y5L4 95 aaPredicted RBP16.44■□□□□ 0.22
UBXN4-203ENST00000416538 FANCMQ8IYD8 2048 aa16.44■□□□□ 0.22
UBXN4-203ENST00000416538 NUP210Q8TEM1 1887 aaPredicted RBP16.44■□□□□ 0.22
UBXN4-203ENST00000416538 ARHGEF37A1IGU5 675 aa16.43■□□□□ 0.22
UBXN4-203ENST00000416538 M0QZQ0 153 aa16.43■□□□□ 0.22
UBXN4-203ENST00000416538 PTPN5P54829 565 aa16.43■□□□□ 0.22
UBXN4-203ENST00000416538 ARPP19P56211 112 aa16.43■□□□□ 0.22
UBXN4-203ENST00000416538 SLC39A14Q15043 492 aa16.43■□□□□ 0.22
UBXN4-203ENST00000416538 CTXN3Q4LDR2 81 aa16.43■□□□□ 0.22
UBXN4-203ENST00000416538 ASTLQ6HA08 431 aaPredicted RBP16.43■□□□□ 0.22
UBXN4-203ENST00000416538 CRELD2Q6UXH1 353 aaPredicted RBP16.43■□□□□ 0.22
UBXN4-203ENST00000416538 ZNF461Q8TAF7 563 aa16.43■□□□□ 0.22
UBXN4-203ENST00000416538 UBQLN1Q9UMX0 589 aaKnown RBP16.43■□□□□ 0.22
UBXN4-203ENST00000416538 PCDHB8Q9UN66 801 aa16.43■□□□□ 0.22
UBXN4-203ENST00000416538 STYXL1Q9Y6J8 313 aa16.43■□□□□ 0.22
UBXN4-203ENST00000416538 CACNA1IQ9P0X4 2223 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 SPTLC1O15269 473 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 XYLBO75191 536 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 GABBR2O75899 941 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 RHOP08100 348 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 OR4Q2P0C623 313 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 SRFP11831 508 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 CD44P16070 742 aaKnown RBP16.42■□□□□ 0.22
UBXN4-203ENST00000416538 CEBPBP17676 345 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 ADSSP30520 456 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 ACOT2P49753 483 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 UVSSAQ2YD98 709 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 PABPC1LQ4VXU2 614 aaKnown RBP16.42■□□□□ 0.22
UBXN4-203ENST00000416538 RRAGBQ5VZM2 374 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 ZNF280DQ6N043 979 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 ZNF720Q7Z2F6 126 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 EFCAB13Q8IY85 973 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 FLCNQ8NFG4 579 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 GPR152Q8TDT2 470 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 FAM84AQ96KN4 292 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 CRISPLD1Q9H336 500 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 RPF1Q9H9Y2 349 aaKnown RBP16.42■□□□□ 0.22
UBXN4-203ENST00000416538 TBC1D7Q9P0N9 293 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 CA14Q9ULX7 337 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 INSL5Q9Y5Q6 135 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 MYO15AQ9UKN7 3530 aa16.42■□□□□ 0.22
UBXN4-203ENST00000416538 KIF26AQ9ULI4 1882 aaPredicted RBP16.42■□□□□ 0.22
UBXN4-203ENST00000416538 FRMD3A2A2Y4 597 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 GALR2O43603 387 aaPredicted RBP16.41■□□□□ 0.22
UBXN4-203ENST00000416538 ATF2P15336 505 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 AOC1P19801 751 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 CYP3A5P20815 502 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 CCR2P41597 374 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 PRSS36Q5K4E3 855 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 SPATA1Q5VX52 437 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 RNF19BQ6ZMZ0 732 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 TCEAL8Q8IYN2 117 aa16.41■□□□□ 0.22
UBXN4-203ENST00000416538 KRI1Q8N9T8 703 aaKnown RBP16.41■□□□□ 0.22
UBXN4-203ENST00000416538 LINC00301Q8NCQ3 95 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms