RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 ECHDC2Q86YB7 292 aa8.29□□□□□ -1.08
SIK3-203ENST00000415541 MCF2L2Q86YR7 1114 aa8.29□□□□□ -1.08
SIK3-203ENST00000415541 SLC15A3Q8IY34 581 aa8.29□□□□□ -1.08
SIK3-203ENST00000415541 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
SIK3-203ENST00000415541 GDAP1Q8TB36 358 aa8.29□□□□□ -1.08
SIK3-203ENST00000415541 TRIM11Q96F44 468 aa8.29□□□□□ -1.08
SIK3-203ENST00000415541 OTUD5Q96G74 571 aa8.29□□□□□ -1.08
SIK3-203ENST00000415541 SH2D3AQ9BRG2 576 aa8.29□□□□□ -1.08
SIK3-203ENST00000415541 IDI2Q9BXS1 227 aa8.29□□□□□ -1.08
SIK3-203ENST00000415541 SAR1AQ9NR31 198 aa8.29□□□□□ -1.08
SIK3-203ENST00000415541 FAIMQ9NVQ4 179 aa8.29□□□□□ -1.08
SIK3-203ENST00000415541 LRRC53A6NM62 1247 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 A8MXQ7 604 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 WNT7AO00755 349 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 ADCY3O60266 1144 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 CCNE1P24864 410 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 PLTPP55058 493 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 KHDC1Q4VXA5 237 aaKnown RBP8.28□□□□□ -1.08
SIK3-203ENST00000415541 POTEGQ6S5H5 508 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 FAM47EQ6ZV65 393 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 PEX26Q7Z412 305 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 CDAN1Q8IWY9 1227 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 ANKS1AQ92625 1134 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 SNX27Q96L92 541 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 FNBP1Q96RU3 617 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 KIAA1683Q9H0B3 1180 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 EPB41L1Q9H4G0 881 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 RPAP3Q9H6T3 665 aaPredicted RBP8.28□□□□□ -1.08
SIK3-203ENST00000415541 DKK3Q9UBP4 350 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 KDM3AQ9Y4C1 1321 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 SIGLEC16A6NMB1 481 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 TRAFD1O14545 582 aaPredicted RBP8.28□□□□□ -1.08
SIK3-203ENST00000415541 GYG2O15488 501 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 PYGMP11217 842 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 CAP2P40123 477 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 KLK7P49862 253 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 PLOD1Q02809 727 aaPredicted RBP8.28□□□□□ -1.08
SIK3-203ENST00000415541 KIF22Q14807 665 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 FYB2Q5VWT5 728 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 C1orf228Q6PIY5 440 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 P2RX5Q93086 422 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 VPS50Q96JG6 964 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 RMDN3Q96TC7 470 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 TEKT3Q9BXF9 490 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 NLRC4Q9NPP4 1024 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 NDE1Q9NXR1 346 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 EURLQ9NYK6 297 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 ZFP69BQ9UJL9 534 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 PACSIN2Q9UNF0 486 aaPredicted RBP8.28□□□□□ -1.08
SIK3-203ENST00000415541 RABGAP1Q9Y3P9 1069 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 IQCA1LA6NCM1 817 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 A6NJR5 290 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 SLC37A4O43826 429 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 PLA2G4BP0C869 781 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 FUT4P22083 530 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 AP2B1P63010 937 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 DR1Q01658 176 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 PLCB3Q01970 1234 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 FUT2Q10981 343 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 SNRNP48Q6IEG0 339 aaKnown RBP8.28□□□□□ -1.08
SIK3-203ENST00000415541 CCDC125Q86Z20 511 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 SCYL3Q8IZE3 742 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 DTX3LQ8TDB6 740 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 CLIC5Q9NZA1 410 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 ABCB11O95342 1321 aa8.28□□□□□ -1.08
SIK3-203ENST00000415541 A0A087X0B3 334 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 KLRG2A4D1S0 409 aaPredicted RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 STK10O94804 968 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 TBL3Q12788 808 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 ASPHQ12797 758 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 RAPGEF1Q13905 1077 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 VWA3BQ502W6 1294 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 XKR9Q5GH70 373 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 SH3D19Q5HYK7 790 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 MFSD5Q6N075 450 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 PDXDC1Q6P996 788 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 IZUMO2Q6UXV1 221 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 RNF207Q6ZRF8 634 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 RSPH3Q86UC2 560 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 EXOC8Q8IYI6 725 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 CCDC77Q9BR77 488 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 GLIS2Q9BZE0 524 aaPredicted RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 RIOX1Q9H6W3 641 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 PARVBQ9HBI1 364 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 METTL5Q9NRN9 209 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 RNF146Q9NTX7 359 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 FEM1BQ9UK73 627 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 GINS2Q9Y248 185 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 DIS3Q9Y2L1 958 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 STARD13Q9Y3M8 1113 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 HBS1LQ9Y450 684 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 A0A1W2PRG0 241 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 KRT36O76013 467 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 BRAFP15056 766 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 GM2AP17900 193 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 KLRC1P26715 233 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 HALP42357 657 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 CYP2J2P51589 502 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 GEMIN4P57678 1058 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 IRX4P78413 519 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms