RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 KCNA2P16389 499 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 CD58P19256 250 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 NOMO3P69849 1222 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 GCNT1Q02742 428 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 NT5C1BQ96P26 610 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 VEZTQ9HBM0 779 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 AVENQ9NQS1 362 aaPredicted RBP10.5□□□□□ -0.73
SS18-203ENST00000415083 USP15Q9Y4E8 981 aaPredicted RBP10.5□□□□□ -0.73
SS18-203ENST00000415083 PROSCO94903 275 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 MYCLP12524 364 aaPredicted RBP10.5□□□□□ -0.73
SS18-203ENST00000415083 KRT10P13645 584 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 KRT5P13647 590 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 SNRPFP62306 86 aaKnown RBP10.5□□□□□ -0.73
SS18-203ENST00000415083 SP2Q02086 613 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 MEX3CQ5U5Q3 659 aaKnown RBP10.5□□□□□ -0.73
SS18-203ENST00000415083 CCDC60Q8IWA6 550 aaPredicted RBP10.5□□□□□ -0.73
SS18-203ENST00000415083 TCP11Q8WWU5 503 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 VTI1AQ96AJ9 217 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 ARHGAP28Q9P2N2 729 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 ASIC3Q9UHC3 531 aa10.5□□□□□ -0.73
SS18-203ENST00000415083 PIAS1O75925 651 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 NQO1P15559 274 aaKnown RBP10.49□□□□□ -0.73
SS18-203ENST00000415083 KCNA3P22001 575 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 GBP1P32455 592 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 CDR1P51861 262 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 ZKSCAN8Q15776 578 aaPredicted RBP10.49□□□□□ -0.73
SS18-203ENST00000415083 WDR72Q3MJ13 1102 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 ZACNQ401N2 412 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 HP1BP3Q5SSJ5 553 aaPredicted RBP10.49□□□□□ -0.73
SS18-203ENST00000415083 EP400NLQ6ZTU2 488 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 RELL1Q8IUW5 271 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 UBR7Q8N806 425 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 TBC1D31Q96DN5 1066 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 ECT2Q9H8V3 914 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 EBF2Q9HAK2 575 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 ARHGEF3Q9NR81 526 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 ZNF277Q9NRM2 450 aaPredicted RBP10.49□□□□□ -0.73
SS18-203ENST00000415083 MTUS1Q9ULD2 1270 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 NFASCO94856 1347 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 PI4K2BG5E9Z4 385 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 IGF2BP3O00425 579 aaKnown RBP eCLIP10.49□□□□□ -0.73
SS18-203ENST00000415083 BRAFP15056 766 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 CETN1Q12798 172 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 NUGGCQ68CJ6 796 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 ZNF276Q8N554 614 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 REPS2Q8NFH8 660 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 OR5B17Q8NGF7 314 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 ACSF2Q96CM8 615 aaPredicted RBP10.49□□□□□ -0.73
SS18-203ENST00000415083 ADAM33Q9BZ11 813 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 KMT5AQ9NQR1 393 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 ANKEF1Q9NU02 776 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 NUB1Q9Y5A7 615 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 WNT10BO00744 389 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 ACOT2P49753 483 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 SEZ6Q53EL9 994 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 PLEKHA7Q6IQ23 1121 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 TAX1BP1Q86VP1 789 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 CCDC63Q8NA47 563 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 SPIRE2Q8WWL2 714 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 C11orf70Q9BRQ4 267 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 C10orf88Q9H8K7 445 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 EHMT1Q9H9B1 1298 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 TBC1D22BQ9NU19 505 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 GABBR1Q9UBS5 961 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 DNPEPQ9ULA0 475 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 FZD1Q9UP38 647 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 CNTNAP2Q9UHC6 1331 aa10.49□□□□□ -0.73
SS18-203ENST00000415083 ASMTLO95671 621 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 HLA-DRAP01903 254 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 GTF2H1P32780 548 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 NF2P35240 595 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 DLGAP5Q15398 846 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 GPD1LQ8N335 351 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 WDTC1Q8N5D0 677 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 GIMAP7Q8NHV1 300 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 RMDN3Q96TC7 470 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 MOV10L1Q9BXT6 1211 aaKnown RBP10.48□□□□□ -0.73
SS18-203ENST00000415083 SLCO1B3Q9NPD5 702 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 ANAPC5Q9UJX4 755 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 HGSO14964 777 aaPredicted RBP10.48□□□□□ -0.73
SS18-203ENST00000415083 RPSAP08865 295 aaKnown RBP10.48□□□□□ -0.73
SS18-203ENST00000415083 CLTAP09496 248 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 T-ENOLP0DO92 83 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 GM2AP17900 193 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 RIPK1Q13546 671 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 IZUMO3Q5VZ72 239 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.48□□□□□ -0.73
SS18-203ENST00000415083 SRRM1Q8IYB3 904 aaKnown RBP10.48□□□□□ -0.73
SS18-203ENST00000415083 ARFGAP1Q8N6T3 406 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 ATL2Q8NHH9 583 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 THOC1Q96FV9 657 aaKnown RBP10.48□□□□□ -0.73
SS18-203ENST00000415083 ZNF570Q96NI8 536 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 RUNDC3BQ96NL0 473 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 SENP7Q9BQF6 1050 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 TRAIPQ9BWF2 469 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 CNTN6Q9UQ52 1028 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 STYXL1Q9Y6J8 313 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 C3orf70A6NLC5 250 aaPredicted RBP10.48□□□□□ -0.73
SS18-203ENST00000415083 WDR64B1ANS9 1081 aa10.48□□□□□ -0.73
SS18-203ENST00000415083 LIASO43766 372 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms