RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 CTC1Q2NKJ3 1217 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 ZCWPW2Q504Y3 356 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 KIAA0319Q5VV43 1072 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 C9orf57Q5W0N0 161 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 CEP135Q66GS9 1140 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 INTS8Q75QN2 995 aaKnown RBP15.82■□□□□ 0.12
LIMS1-206ENST00000414829 CEP57Q86XR8 500 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 EFCAB13Q8IY85 973 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 ADSSL1Q8N142 457 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 CGRRF1Q99675 332 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 INTS13Q9NVM9 706 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 CLDND1Q9NY35 253 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 CACNG4Q9UBN1 327 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 PCDHB8Q9UN66 801 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 MAPK8IP1Q9UQF2 711 aa15.82■□□□□ 0.12
LIMS1-206ENST00000414829 F8W810 466 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 C2CD2LO14523 706 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 CETN3O15182 167 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 DLATP10515 647 aaKnown RBP15.81■□□□□ 0.12
LIMS1-206ENST00000414829 EPB41P11171 864 aaKnown RBP15.81■□□□□ 0.12
LIMS1-206ENST00000414829 HOXB8P17481 243 aaPredicted RBP15.81■□□□□ 0.12
LIMS1-206ENST00000414829 TNNI1P19237 187 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 KLRC2P26717 231 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 PSMC2P35998 433 aaKnown RBP15.81■□□□□ 0.12
LIMS1-206ENST00000414829 PRCPP42785 496 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 MRPS5P82675 430 aaKnown RBP15.81■□□□□ 0.12
LIMS1-206ENST00000414829 RBP5P82980 135 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 FKBP3Q00688 224 aaKnown RBP15.81■□□□□ 0.12
LIMS1-206ENST00000414829 MYO1EQ12965 1108 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 MYO9BQ13459 2157 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 MORC3Q14149 939 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 PSMD5Q16401 504 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 PRRC2BQ5JSZ5 2229 aaKnown RBP15.81■□□□□ 0.12
LIMS1-206ENST00000414829 CENPPQ6IPU0 288 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 DSTYKQ6XUX3 929 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 TMEM184AQ6ZMB5 413 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 EP400NLQ6ZTU2 488 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 ADGRD2Q7Z7M1 963 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 RBM23Q86U06 439 aaKnown RBP15.81■□□□□ 0.12
LIMS1-206ENST00000414829 SMYD4Q8IYR2 804 aaPredicted RBP15.81■□□□□ 0.12
LIMS1-206ENST00000414829 C3orf58Q8NDZ4 430 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 TMC2Q8TDI7 906 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 RABGGTAQ92696 567 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 MFSD14AQ96MC6 490 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 MTMR12Q9C0I1 747 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 IGFLR1Q9H665 355 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 DACH1Q9UI36 760 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 BACE2Q9Y5Z0 518 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 TRANK1O15050 2925 aa15.81■□□□□ 0.12
LIMS1-206ENST00000414829 SPDYE4A6NLX3 237 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 M0QZQ0 153 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 PIRO00625 290 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 SLC16A3O15427 465 aaKnown RBP15.8■□□□□ 0.12
LIMS1-206ENST00000414829 LILRB3O75022 631 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 GLUD1P00367 558 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 CNPP09543 421 aaKnown RBP15.8■□□□□ 0.12
LIMS1-206ENST00000414829 TYMPP19971 482 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 YWHAHQ04917 246 aaPredicted RBP15.8■□□□□ 0.12
LIMS1-206ENST00000414829 ADAM9Q13443 819 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 ADAM15Q13444 863 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 CAMK4Q16566 473 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 ZNF280DQ6N043 979 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.8■□□□□ 0.12
LIMS1-206ENST00000414829 FAM186BQ8IYM0 893 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 RDH13Q8NBN7 331 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 SPATA18Q8TC71 538 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 HDAC7Q8WUI4 952 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 CCDC127Q96BQ5 260 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 KLHL5Q96PQ7 755 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 MTRRQ9UBK8 725 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 PCDHGC5Q9Y5F6 944 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 HCFC2Q9Y5Z7 792 aa15.8■□□□□ 0.12
LIMS1-206ENST00000414829 TDRD15B5MCY1 1934 aaKnown RBP15.8■□□□□ 0.12
LIMS1-206ENST00000414829 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.79■□□□□ 0.12
LIMS1-206ENST00000414829 IKBKBO14920 756 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 PER2O15055 1255 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 TEX28O15482 410 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 STX10O60499 249 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 CLASP2O75122 1294 aaKnown RBP15.79■□□□□ 0.12
LIMS1-206ENST00000414829 FGFR1OPO95684 399 aaKnown RBP15.79■□□□□ 0.12
LIMS1-206ENST00000414829 ITGB3P05106 788 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 KRT19P08727 400 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 KCNA5P22460 613 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 CCNE1P24864 410 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 TKTP29401 623 aaKnown RBP15.79■□□□□ 0.12
LIMS1-206ENST00000414829 POLR2BP30876 1174 aaKnown RBP15.79■□□□□ 0.12
LIMS1-206ENST00000414829 BRCC3P46736 316 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 LILRA4P59901 499 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 PAK1Q13153 545 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 LEXMQ3ZCV2 418 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 RTP2Q5QGT7 225 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 RTL10Q7L3V2 364 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 METTL23Q86XA0 190 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 CSGALNACT2Q8N6G5 542 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 C1orf127Q8N9H9 656 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 MLKLQ8NB16 471 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 ZSWIM2Q8NEG5 633 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 AUTS2Q8WXX7 1259 aa15.79■□□□□ 0.12
LIMS1-206ENST00000414829 ERCC4Q92889 916 aaPredicted RBP15.79■□□□□ 0.12
LIMS1-206ENST00000414829 SYAP1Q96A49 352 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms