RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 PCIF1Q9H4Z3 704 aa10.93□□□□□ -0.66
TMEM248-202ENST00000413593 AGPAT3Q9NRZ7 376 aa10.93□□□□□ -0.66
TMEM248-202ENST00000413593 RBAKQ9NYW8 714 aaPredicted RBP10.93□□□□□ -0.66
TMEM248-202ENST00000413593 USP15Q9Y4E8 981 aaPredicted RBP10.93□□□□□ -0.66
TMEM248-202ENST00000413593 TDRD15B5MCY1 1934 aaKnown RBP10.92□□□□□ -0.66
TMEM248-202ENST00000413593 XIRP2A4UGR9 3374 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 PPEF2O14830 753 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 SYN3O14994 580 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 RHOBTB3O94955 611 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 C1RP00736 705 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 AARSP49588 968 aaKnown RBP eCLIP10.92□□□□□ -0.66
TMEM248-202ENST00000413593 SNRPFP62306 86 aaKnown RBP10.92□□□□□ -0.66
TMEM248-202ENST00000413593 KNOP1Q1ED39 458 aaKnown RBP10.92□□□□□ -0.66
TMEM248-202ENST00000413593 KANK3Q6NY19 840 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 HS2ST1Q7LGA3 356 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 PALB2Q86YC2 1186 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 NT5DC4Q86YG4 428 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 CBWD2Q8IUF1 395 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 GLYCTKQ8IVS8 523 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 EFCAB13Q8IY85 973 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 C12orf76Q8N812 135 aaPredicted RBP10.92□□□□□ -0.66
TMEM248-202ENST00000413593 CCDC34Q96HJ3 373 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 SUSD3Q96L08 255 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 CLSTN3Q9BQT9 956 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 ADAM7Q9H2U9 754 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 HSPBP1Q9NZL4 362 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 MTRRQ9UBK8 725 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 PRKAG3Q9UGI9 489 aa10.92□□□□□ -0.66
TMEM248-202ENST00000413593 SPTBN5Q9NRC6 3674 aaKnown RBP10.91□□□□□ -0.66
TMEM248-202ENST00000413593 ANO9A1A5B4 782 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 C19orf67A6NJJ6 358 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 M0QZQ0 153 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 PIRO00625 290 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 CLIC2O15247 247 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 ADAM12O43184 909 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 TGM5O43548 720 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 ZP2Q05996 745 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 ITIH3Q06033 890 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 KCNB1Q14721 858 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 VARS2Q5ST30 1063 aaKnown RBP10.91□□□□□ -0.66
TMEM248-202ENST00000413593 RARS2Q5T160 578 aaKnown RBP10.91□□□□□ -0.66
TMEM248-202ENST00000413593 C9orf57Q5W0N0 161 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 LILRA6Q6PI73 481 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 RSPO2Q6UXX9 243 aaPredicted RBP10.91□□□□□ -0.66
TMEM248-202ENST00000413593 ANKS3Q6ZW76 656 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 ADHFE1Q8IWW8 467 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 C12orf56Q8IXR9 622 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 NOC3LQ8WTT2 800 aaKnown RBP10.91□□□□□ -0.66
TMEM248-202ENST00000413593 CCDC47Q96A33 483 aaKnown RBP10.91□□□□□ -0.66
TMEM248-202ENST00000413593 SFXN1Q9H9B4 322 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 KIAA1586Q9HCI6 787 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 PDE11AQ9HCR9 933 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 MAN1C1Q9NR34 630 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 DPP3Q9NY33 737 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 CGNQ9P2M7 1197 aaKnown RBP10.91□□□□□ -0.66
TMEM248-202ENST00000413593 DPP7Q9UHL4 492 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 CDH22Q9UJ99 828 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 PCDHB8Q9UN66 801 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 BACE2Q9Y5Z0 518 aa10.91□□□□□ -0.66
TMEM248-202ENST00000413593 ZNF233A6NK53 670 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 TBC1D4O60343 1298 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 GADD45BO75293 160 aaPredicted RBP10.9□□□□□ -0.66
TMEM248-202ENST00000413593 SPATA31D3P0C874 917 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 PAX3P23760 479 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 OR1D2P34982 312 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 CYP2J2P51589 502 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 LILRA4P59901 499 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 TFAMQ00059 246 aaKnown RBP10.9□□□□□ -0.66
TMEM248-202ENST00000413593 PNOCQ13519 176 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 RAB33AQ14088 237 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 MRPL58Q14197 206 aaKnown RBP10.9□□□□□ -0.66
TMEM248-202ENST00000413593 CBX2Q14781 532 aaPredicted RBP10.9□□□□□ -0.66
TMEM248-202ENST00000413593 SNRNP35Q16560 246 aaKnown RBP10.9□□□□□ -0.66
TMEM248-202ENST00000413593 CES5AQ6NT32 575 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 ELMSAN1Q6PJG2 1045 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 TMC5Q6UXY8 1006 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 SPATA31D4Q6ZUB0 917 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 XXYLT1Q8NBI6 393 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 KREMEN2Q8NCW0 462 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 APPL2Q8NEU8 664 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 CMASQ8NFW8 434 aaPredicted RBP10.9□□□□□ -0.66
TMEM248-202ENST00000413593 GOLGA5Q8TBA6 731 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 FEZF2Q8TBJ5 459 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 HDAC7Q8WUI4 952 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 FAM84AQ96KN4 292 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 TIGD1Q96MW7 591 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 KCTD10Q9H3F6 313 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 PLEKHA4Q9H4M7 779 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 CD320Q9NPF0 282 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 FBXW11Q9UKB1 542 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 CDY1Q9Y6F8 540 aa10.9□□□□□ -0.66
TMEM248-202ENST00000413593 H7C4K7 107 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 TNFRSF10AO00220 468 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 TULP1O00294 542 aaPredicted RBP10.89□□□□□ -0.67
TMEM248-202ENST00000413593 PDXKO00764 312 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 SPTLC1O15269 473 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 KIF20AO95235 890 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 WEE2P0C1S8 567 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 MTHFRP42898 656 aa10.89□□□□□ -0.67
TMEM248-202ENST00000413593 SLC8B1Q6J4K2 584 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms