RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 SH2B1Q9NRF2 756 aaPredicted RBP6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 HPCAL4Q9UM19 191 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 TRIM17Q9Y577 477 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 ABCC10Q5T3U5 1492 aa6.38□□□□□ -1.39
CBX1P3-201ENST00000413296 A0A0B4J203 849 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 ARHGAP10A1A4S6 786 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 TAF4O00268 1085 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 VILLO15195 856 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 FANCGO15287 622 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 TBX10O75333 385 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 PIAS2O75928 621 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 TK1P04183 234 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 ANXA2P07355 339 aaKnown RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 LAMP2P13473 410 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 KRT15P19012 456 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 BTF3P20290 206 aaKnown RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 TGM1P22735 817 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 KRT2P35908 639 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 CCT4P50991 539 aaKnown RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 ZNF41P51814 821 aaPredicted RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 WDR4P57081 412 aaKnown RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 JAM2P57087 298 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 IL10RAQ13651 578 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 PUM1Q14671 1186 aaKnown RBP eCLIP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 SUZ12Q15022 739 aaKnown RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 TBCEQ15813 527 aaPredicted RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 BMP2KLQ5H9B9 411 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 PITRM1Q5JRX3 1037 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 KLHDC10Q6PID8 442 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 ELMSAN1Q6PJG2 1045 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 FIP1L1Q6UN15 594 aaKnown RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 CATSPERGQ6ZRH7 1159 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 RUFY3Q7L099 469 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 PIWIL3Q7Z3Z3 882 aaKnown RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 TMC6Q7Z403 805 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 RAB44Q7Z6P3 723 aaPredicted RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 VSIG10LQ86VR7 867 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 OSTM1Q86WC4 334 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 CCDC103Q8IW40 242 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 DIS3L2Q8IYB7 885 aaKnown RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 ANKRD20A12PQ8NF67 263 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 Q8NFD4 153 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 IL17RDQ8NFM7 739 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 ZNF75CPQ92670 426 aaPredicted RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 HDAC10Q969S8 669 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 ZNF653Q96CK0 615 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 WDR89Q96FK6 387 aaPredicted RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 SUCLG2Q96I99 432 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 MFSD14AQ96MC6 490 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 HS3ST6Q96QI5 342 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 GDF15Q99988 308 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 DSCC1Q9BVC3 393 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 KLF16Q9BXK1 252 aaPredicted RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 ACE2Q9BYF1 805 aaPredicted RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 ZCWPW1Q9H0M4 648 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 SUDS3Q9H7L9 328 aaPredicted RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 COPS7BQ9H9Q2 264 aaPredicted RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 SMURF1Q9HCE7 757 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 NECTIN3Q9NQS3 549 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 INCENPQ9NQS7 918 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 COQ3Q9NZJ6 369 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 COL20A1Q9P218 1284 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 UBA2Q9UBT2 640 aaPredicted RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 AFF4Q9UHB7 1163 aaKnown RBP6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 AP1M2Q9Y6Q5 423 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 WASF2Q9Y6W5 498 aa6.37□□□□□ -1.39
CBX1P3-201ENST00000413296 PIK3R4Q99570 1358 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 ATXN7O15265 892 aaPredicted RBP6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 ASAP2O43150 1006 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 ASNA1O43681 348 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 PRPSAP2O60256 369 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 NDST3O95803 873 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 RPLP2P05387 115 aaKnown RBP6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 MSL3P1P0C860 447 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 TMIGD3P0DMS9 266 aaPredicted RBP6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 CYP2A6P11509 494 aaPredicted RBP6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 RHOQP17081 205 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 MAOBP27338 520 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 PBLDP30039 288 aaPredicted RBP6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 TLX1P31314 330 aaPredicted RBP6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 AKT1P31749 480 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 EIF2DP41214 584 aaKnown RBP6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 PSMC4P43686 418 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 KCNC1P48547 511 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 HK3P52790 923 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 RRP1P56182 461 aaKnown RBP6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 POU4F1Q01851 419 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 GALNT2Q10471 571 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 RABEP1Q15276 862 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 BAK1Q16611 211 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 C3orf38Q5JPI3 329 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 ATG16L1Q676U5 607 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 HHIPL2Q6UWX4 724 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 EP400NLQ6ZTU2 488 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 ESPNLQ6ZVH7 1005 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 LYSMD3Q7Z3D4 306 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 KIAA2013Q8IYS2 634 aa6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 C17orf53Q8N3J3 647 aaPredicted RBP6.36□□□□□ -1.39
CBX1P3-201ENST00000413296 C10orf53Q8N6V4 93 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms