RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NTPCRQ9BSD7 190 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 PALMDQ9NP74 551 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 SH3GLB2Q9NR46 395 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ABHD10Q9NUJ1 306 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.53□□□□□ -1.52
HERC4-205ENST00000412272 TRNAU1APQ9NX07 287 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 AIPL1Q9NZN9 384 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 SLC7A8Q9UHI5 535 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 RPH3AQ9Y2J0 694 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 FMN2Q9NZ56 1722 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 TLDC2A0PJX2 215 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 O00370 1275 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 CLOCKO15516 846 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 ECE2O60344 883 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 UFL1O94874 794 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 KRT75O95678 551 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 VHLP40337 213 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 HADHAP40939 763 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 ME1P48163 572 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 ACY1Q03154 408 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 RBL2Q08999 1139 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 LETM2Q2VYF4 491 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 DALRD3Q5D0E6 543 aaKnown RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 ELMSAN1Q6PJG2 1045 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 DCLRE1AQ6PJP8 1040 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 DHRS4L2Q6PKH6 230 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 IDO2Q6ZQW0 420 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 SATL1Q86VE3 508 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 ZC3H18Q86VM9 953 aaKnown RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 SFR1Q86XK3 245 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 TICAM1Q8IUC6 712 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 TTLL11Q8NHH1 800 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 ANKS1AQ92625 1134 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 KLHL29Q96CT2 875 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 RMDN1Q96DB5 314 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 COQ7Q99807 217 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 BTBD2Q9BX70 525 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 PITHD1Q9GZP4 211 aaPredicted RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 CDH19Q9H159 772 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 ASCC2Q9H1I8 757 aaPredicted RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 MARCH7Q9H992 704 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 CAPN6Q9Y6Q1 641 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 A6NCN8 305 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 OR6C65A6NJZ3 312 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 CHURC1-FNTBB4DL54 471 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 GYPCP04921 128 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 MUTP22033 750 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 IL13P35225 146 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 PTGS2P35354 604 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 KRT6CP48668 564 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 PCYT1AP49585 367 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 COPS2P61201 443 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 MRPS15P82914 257 aaKnown RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 AP1B1Q10567 949 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 SQLEQ14534 574 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 MEA1Q16626 185 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 PODNQ7Z5L7 613 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 FAM124AQ86V42 546 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 NLRP10Q86W26 655 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 NME9Q86XW9 330 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 CCDC116Q8IYX3 515 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 REXO5Q96IC2 774 aaKnown RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 CEP170P1Q96L14 293 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 DNAJC7Q99615 494 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 WACQ9BTA9 647 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 RBM38Q9H0Z9 239 aaKnown RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 SP140LQ9H930 580 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 ALKQ9UM73 1620 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 NPHP3-ACAD11A0A0J9YXS1 232 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 FYB1O15117 783 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 RGS20O76081 388 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 PRLP01236 227 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 ATP1A1P05023 1023 aaKnown RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 KRT10P13645 584 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 RAC2P15153 192 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 VCLP18206 1134 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 ATF6P18850 670 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 BMP6P22004 513 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 DNAJB1P25685 340 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 PCSK6P29122 969 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 STX2P32856 288 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 EPS15P42566 896 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 DNAJC3Q13217 504 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 SMU1Q2TAY7 513 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 CERKLQ49MI3 558 aaPredicted RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 HERC4Q5GLZ8 1057 aaPredicted RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 NIPAL1Q6NVV3 410 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 CCDC129Q6ZRS4 1044 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 MFSD6Q6ZSS7 791 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 PJA1Q8NG27 643 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 TLCD1Q96CP7 247 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 FAM167AQ96KS9 214 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 TMEM237Q96Q45 408 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 HEMGNQ9BXL5 484 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 RAD21L1Q9H4I0 556 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 LIMA1Q9UHB6 759 aaKnown RBP5.52□□□□□ -1.53
HERC4-205ENST00000412272 RABGAP1Q9Y3P9 1069 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 SNX8Q9Y5X2 465 aa5.52□□□□□ -1.53
HERC4-205ENST00000412272 MROH7-TTC4A0A0A0MT08 1334 aa5.51□□□□□ -1.53
HERC4-205ENST00000412272 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms