RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 WDR49Q8IV35 697 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 ZC3H3Q8IXZ2 948 aaKnown RBP15.08■□□□□ 0
CPNE1-206ENST00000412056 FAM186BQ8IYM0 893 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 CACTINQ8WUQ7 758 aaKnown RBP15.08■□□□□ 0
CPNE1-206ENST00000412056 ANKRD36BP1Q96IX9 119 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 POP1Q99575 1024 aaKnown RBP15.08■□□□□ 0
CPNE1-206ENST00000412056 DUSP9Q99956 384 aaKnown RBP15.08■□□□□ 0
CPNE1-206ENST00000412056 NGRNQ9NPE2 291 aaKnown RBP15.08■□□□□ 0
CPNE1-206ENST00000412056 STK39Q9UEW8 545 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 SZT2Q5T011 3432 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 LRRIQ3A6PVS8 624 aaPredicted RBP15.07■□□□□ 0
CPNE1-206ENST00000412056 PIRO00625 290 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 CETN3O15182 167 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 MAPK13O15264 365 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 TNNC2P02585 160 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 ITGB3P05106 788 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 TNNI1P19237 187 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 TKTP29401 623 aaKnown RBP15.07■□□□□ 0
CPNE1-206ENST00000412056 POLR2BP30876 1174 aaKnown RBP15.07■□□□□ 0
CPNE1-206ENST00000412056 NRIP1P48552 1158 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 DLG4P78352 724 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 FKBP3Q00688 224 aaKnown RBP15.07■□□□□ 0
CPNE1-206ENST00000412056 DSG1Q02413 1049 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 USP41Q3LFD5 358 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 DPCR1Q3MIW9 517 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 RTP2Q5QGT7 225 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 KIAA0319Q5VV43 1072 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 KIAA1841Q6NSI8 718 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 PRSS55Q6UWB4 352 aaPredicted RBP15.07■□□□□ 0
CPNE1-206ENST00000412056 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.07■□□□□ 0
CPNE1-206ENST00000412056 CEP57Q86XR8 500 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 MRPL43Q8N983 215 aaKnown RBP15.07■□□□□ 0
CPNE1-206ENST00000412056 CXorf38Q8TB03 319 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 TMC2Q8TDI7 906 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 PARD3BQ8TEW8 1205 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 ZNF516Q92618 1163 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 SUSD3Q96L08 255 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 CHST7Q9NS84 486 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 SIX4Q9UIU6 781 aa15.07■□□□□ 0
CPNE1-206ENST00000412056 BICDL2A1A5D9 508 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 PER2O15055 1255 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 SPTLC1O15269 473 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 TRAPPC3O43617 180 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 LILRB3O75022 631 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 EPB41P11171 864 aaKnown RBP15.06■□□□□ 0
CPNE1-206ENST00000412056 FGFR3P22607 806 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 PSMC2P35998 433 aaKnown RBP15.06■□□□□ 0
CPNE1-206ENST00000412056 AARSP49588 968 aaKnown RBP eCLIP15.06■□□□□ 0
CPNE1-206ENST00000412056 VAMP7P51809 220 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 NLRP12P59046 1061 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 BMS1Q14692 1282 aaKnown RBP15.06■□□□□ 0
CPNE1-206ENST00000412056 DUSP6Q16828 381 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 DUOXA2Q1HG44 320 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 CAVIN1Q6NZI2 390 aaKnown RBP15.06■□□□□ 0
CPNE1-206ENST00000412056 CSGALNACT2Q8N6G5 542 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 RIN2Q8WYP3 895 aaPredicted RBP15.06■□□□□ 0
CPNE1-206ENST00000412056 PPP2R3CQ969Q6 453 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 TTPALQ9BTX7 342 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 MKNK1Q9BUB5 465 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 IGFLR1Q9H665 355 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 TLE6Q9H808 572 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 MRPL17Q9NRX2 175 aaKnown RBP15.06■□□□□ 0
CPNE1-206ENST00000412056 ITGA11Q9UKX5 1188 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 AGAP1Q9UPQ3 857 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 IRAK3Q9Y616 596 aa15.06■□□□□ 0
CPNE1-206ENST00000412056 LINC01565O15544 149 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 KRT19P08727 400 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 TRIM49P0CI25 452 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 TRIM49CP0CI26 452 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 KRT13P13646 458 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 RPL17P18621 184 aaKnown RBP15.05■□□□□ -0
CPNE1-206ENST00000412056 TAF6P49848 677 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 LILRA4P59901 499 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 BFSP1Q12934 665 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 SKIV2LQ15477 1246 aaKnown RBP15.05■□□□□ -0
CPNE1-206ENST00000412056 C1orf220Q5T0J3 134 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 FOXR2Q6PJQ5 311 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 DSTYKQ6XUX3 929 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 TRAPPC11Q7Z392 1133 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 MLKLQ8NB16 471 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 PIK3R5Q8WYR1 880 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 BORCS6Q96GS4 357 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 ZNF560Q96MR9 790 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 MED15Q96RN5 788 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 PRDM6Q9NQX0 595 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 PCDHB8Q9UN66 801 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 TRANK1O15050 2925 aa15.05■□□□□ -0
CPNE1-206ENST00000412056 M0QZQ0 153 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 SLC16A3O15427 465 aaKnown RBP15.04■□□□□ -0
CPNE1-206ENST00000412056 CLASP2O75122 1294 aaKnown RBP15.04■□□□□ -0
CPNE1-206ENST00000412056 GLP2RO95838 553 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 CNPP09543 421 aaKnown RBP15.04■□□□□ -0
CPNE1-206ENST00000412056 CLDN10P78369 228 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 RBP5P82980 135 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 RBM10P98175 930 aaKnown RBP15.04■□□□□ -0
CPNE1-206ENST00000412056 PSMD5Q16401 504 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 SV2CQ496J9 727 aa15.04■□□□□ -0
CPNE1-206ENST00000412056 TDRD10Q5VZ19 366 aaKnown RBP15.04■□□□□ -0
CPNE1-206ENST00000412056 INTS8Q75QN2 995 aaKnown RBP15.04■□□□□ -0
CPNE1-206ENST00000412056 GLYCTKQ8IVS8 523 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms