RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 SYNPOQ8N3V7 929 aa7.11□□□□□ -1.27
LINC00396-201ENST00000411690 FAM200AQ8TCP9 573 aa7.11□□□□□ -1.27
LINC00396-201ENST00000411690 DEPDC1BQ8WUY9 529 aa7.11□□□□□ -1.27
LINC00396-201ENST00000411690 UBL7Q96S82 380 aaPredicted RBP7.11□□□□□ -1.27
LINC00396-201ENST00000411690 HNRNPABQ99729 332 aaKnown RBP7.11□□□□□ -1.27
LINC00396-201ENST00000411690 SPZ1Q9BXG8 430 aa7.11□□□□□ -1.27
LINC00396-201ENST00000411690 DUSP15Q9H1R2 295 aaPredicted RBP7.11□□□□□ -1.27
LINC00396-201ENST00000411690 C8orf33Q9H7E9 229 aaPredicted RBP7.11□□□□□ -1.27
LINC00396-201ENST00000411690 TCEAL9Q9UHQ7 104 aa7.11□□□□□ -1.27
LINC00396-201ENST00000411690 ADAM28Q9UKQ2 775 aa7.11□□□□□ -1.27
LINC00396-201ENST00000411690 SAMM50Q9Y512 469 aa7.11□□□□□ -1.27
LINC00396-201ENST00000411690 PCDHA10Q9Y5I2 948 aa7.11□□□□□ -1.27
LINC00396-201ENST00000411690 RAI2Q9Y5P3 530 aa7.11□□□□□ -1.27
LINC00396-201ENST00000411690 SDK1Q7Z5N4 2213 aa7.11□□□□□ -1.27
LINC00396-201ENST00000411690 AKAP13Q12802 2813 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 HELZ2Q9BYK8 2649 aaKnown RBP7.1□□□□□ -1.27
LINC00396-201ENST00000411690 ARL5CA6NH57 179 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 SLC38A8A6NNN8 435 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 IPO5O00410 1097 aaKnown RBP7.1□□□□□ -1.27
LINC00396-201ENST00000411690 IFIT3O14879 490 aaKnown RBP7.1□□□□□ -1.27
LINC00396-201ENST00000411690 ZNF862O60290 1169 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 C1QL1O75973 258 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 ITGA4P13612 1032 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 PTPN2P17706 415 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 SMARCA1P28370 1054 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 MLH1P40692 756 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 SOX9P48436 509 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 DNM2P50570 870 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 SCNN1GP51170 649 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 PSMD5Q16401 504 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 WDR44Q5JSH3 913 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 RTP2Q5QGT7 225 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 ZNF746Q6NUN9 644 aaPredicted RBP7.1□□□□□ -1.27
LINC00396-201ENST00000411690 RTL10Q7L3V2 364 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 CATIPQ7Z7H3 387 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 PLA2G4DQ86XP0 818 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 TICAM2Q86XR7 235 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 RHPN2Q8IUC4 686 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 SMAP1Q8IYB5 467 aaPredicted RBP7.1□□□□□ -1.27
LINC00396-201ENST00000411690 CNNM3Q8NE01 707 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 LNX1Q8TBB1 728 aaPredicted RBP7.1□□□□□ -1.27
LINC00396-201ENST00000411690 PGBD1Q96JS3 809 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 ASB16Q96NS5 453 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 GAD1Q99259 594 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 TTPALQ9BTX7 342 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 OXCT2Q9BYC2 517 aaPredicted RBP7.1□□□□□ -1.27
LINC00396-201ENST00000411690 CYLDQ9NQC7 956 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 AVENQ9NQS1 362 aaPredicted RBP7.1□□□□□ -1.27
LINC00396-201ENST00000411690 AGPAT5Q9NUQ2 364 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 MIOSQ9NXC5 875 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 SLC8A2Q9UPR5 921 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 RAXQ9Y2V3 346 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 COL4A2P08572 1712 aa7.1□□□□□ -1.27
LINC00396-201ENST00000411690 ITPR1Q14643 2758 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 DMXL2Q8TDJ6 3036 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 SF3B1O75533 1304 aaKnown RBP eCLIP7.09□□□□□ -1.27
LINC00396-201ENST00000411690 PATE3B3GLJ2 98 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 J3QKU1 62 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 ZNF197O14709 1029 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 VIPR2P41587 438 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 CLK2P49760 499 aaKnown RBP7.09□□□□□ -1.27
LINC00396-201ENST00000411690 IRX4P78413 519 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 TRDNQ13061 729 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 CCINQ13939 588 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 RAB33AQ14088 237 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 PON2Q15165 354 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 UBXN11Q5T124 520 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 FAM171A1Q5VUB5 890 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 TXNDC11Q6PKC3 985 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 NIPA1Q7RTP0 329 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 RALGPS2Q86X27 583 aaPredicted RBP7.09□□□□□ -1.27
LINC00396-201ENST00000411690 MFSD6LQ8IWD5 586 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 YAF2Q8IY57 180 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 CAMKK1Q8N5S9 505 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 SMG8Q8ND04 991 aaKnown RBP7.09□□□□□ -1.27
LINC00396-201ENST00000411690 CTCFLQ8NI51 663 aaPredicted RBP7.09□□□□□ -1.27
LINC00396-201ENST00000411690 MDM1Q8TC05 714 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 PIK3R5Q8WYR1 880 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 RABGGTAQ92696 567 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 SMARCD2Q92925 531 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 NLRP4Q96MN2 994 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 LZTS2Q9BRK4 669 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 SUV39H2Q9H5I1 410 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 TBC1D22BQ9NU19 505 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 MKL2Q9ULH7 1088 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 DYRK1BQ9Y463 629 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 WDR81Q562E7 1941 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 IGSF10Q6WRI0 2623 aa7.09□□□□□ -1.27
LINC00396-201ENST00000411690 NAV2Q8IVL1 2488 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 NOTCH4Q99466 2003 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 F5P12259 2224 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 MYH9P35579 1960 aaKnown RBP7.08□□□□□ -1.28
LINC00396-201ENST00000411690 WDR27A2RRH5 827 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 MYBPHLA2RUH7 354 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 FAM86B1E9PN63 330 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 SPECC1L-ADORA2AF8WAN1 911 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 ARNTLO00327 626 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 DCLK1O15075 740 aa7.08□□□□□ -1.28
LINC00396-201ENST00000411690 MEFVO15553 781 aaPredicted RBP7.08□□□□□ -1.28
LINC00396-201ENST00000411690 ARHGAP6O43182 974 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms