RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 TMEM191BP0C7N4 346 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 DLATP10515 647 aaKnown RBP9.47□□□□□ -0.89
LINC02539-201ENST00000411615 FGFR1P11362 822 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 TNNI1P19237 187 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 SCNN1GP51170 649 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 WNT7BP56706 349 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 COPS2P61201 443 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 DLG4P78352 724 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 KCNH2Q12809 1159 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 TUSC3Q13454 348 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 ZACNQ401N2 412 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 VWA3BQ502W6 1294 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 C9orf50Q5SZB4 431 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 KRT39Q6A163 491 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 SV2AQ7L0J3 742 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 APTXQ7Z2E3 356 aaKnown RBP9.47□□□□□ -0.89
LINC02539-201ENST00000411615 TRAPPC11Q7Z392 1133 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 EFCAB13Q8IY85 973 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 LRRC43Q8N309 656 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 FAXDC2Q96IV6 333 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 TMEM175Q9BSA9 504 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 RBSNQ9H1K0 784 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 TBC1D13Q9NVG8 400 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 ITGA11Q9UKX5 1188 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 ADGRG1Q9Y653 693 aa9.47□□□□□ -0.89
LINC02539-201ENST00000411615 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.46□□□□□ -0.9
LINC02539-201ENST00000411615 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.46□□□□□ -0.9
LINC02539-201ENST00000411615 TBKBP1A7MCY6 615 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 TMEM189-UBE2V1I3L0A0 370 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 STAU1O95793 577 aaKnown RBP9.46□□□□□ -0.9
LINC02539-201ENST00000411615 ATICP31939 592 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 FMO5P49326 533 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 AFF1P51825 1210 aaKnown RBP9.46□□□□□ -0.9
LINC02539-201ENST00000411615 COPB1P53618 953 aaKnown RBP9.46□□□□□ -0.9
LINC02539-201ENST00000411615 RBP5P82980 135 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 TFAMQ00059 246 aaKnown RBP9.46□□□□□ -0.9
LINC02539-201ENST00000411615 RNASELQ05823 741 aaKnown RBP9.46□□□□□ -0.9
LINC02539-201ENST00000411615 PPP3CAQ08209 521 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 CETN1Q12798 172 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 KRT31Q15323 416 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 FILIP1LQ4L180 1135 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 MIIPQ5JXC2 388 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 TCERG1LQ5VWI1 586 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 SARM1Q6SZW1 724 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 COLGALT2Q8IYK4 626 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 TDHQ8IZJ6 230 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 LRRC52Q8N7C0 313 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 OR5B17Q8NGF7 314 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 CXorf38Q8TB03 319 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 TAF4BQ92750 862 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 FAM193BQ96PV7 902 aaPredicted RBP9.46□□□□□ -0.9
LINC02539-201ENST00000411615 YME1L1Q96TA2 773 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 POP1Q99575 1024 aaKnown RBP9.46□□□□□ -0.9
LINC02539-201ENST00000411615 CXCL16Q9H2A7 254 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 NDST4Q9H3R1 872 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 VRTNQ9H8Y1 702 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 DPP3Q9NY33 737 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 PLAGL2Q9UPG8 496 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 PCDHA11Q9Y5I1 949 aa9.46□□□□□ -0.9
LINC02539-201ENST00000411615 A0A1B0GTH6 734 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 LGALS16A8MUM7 142 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 PIRO00625 290 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 TLL1O43897 1013 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 ZC3H11AO75152 810 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC02539-201ENST00000411615 DDHD2O94830 711 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 POMCP01189 267 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 ALDH2P05091 517 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 FAM163BP0C2L3 166 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 TRIM49P0CI25 452 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 TRIM49CP0CI26 452 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 ATP1A3P13637 1013 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 LAG3P18627 525 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 PNPLA4P41247 253 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 MXI1P50539 228 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 FANCCQ00597 558 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 BTG3Q14201 252 aaPredicted RBP9.45□□□□□ -0.9
LINC02539-201ENST00000411615 NR1I3Q14994 352 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 UPP1Q16831 310 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 SGSM1Q2NKQ1 1148 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 DCAF17Q5H9S7 520 aaPredicted RBP9.45□□□□□ -0.9
LINC02539-201ENST00000411615 GLRA4Q5JXX5 417 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 TDRD10Q5VZ19 366 aaKnown RBP9.45□□□□□ -0.9
LINC02539-201ENST00000411615 DCLRE1AQ6PJP8 1040 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 CREBRFQ8IUR6 639 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 FIBCD1Q8N539 461 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 C1orf127Q8N9H9 656 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 RNF214Q8ND24 703 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 CLP1Q92989 425 aaKnown RBP9.45□□□□□ -0.9
LINC02539-201ENST00000411615 C18orf25Q96B23 403 aaPredicted RBP9.45□□□□□ -0.9
LINC02539-201ENST00000411615 MTMR12Q9C0I1 747 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 CWH43Q9H720 699 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 NRDE2Q9H7Z3 1164 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 AAASQ9NRG9 546 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 STK39Q9UEW8 545 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 INPP5FQ9Y2H2 1132 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 RWDD3Q9Y3V2 267 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 DAAM1Q9Y4D1 1078 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 PTPRJQ12913 1337 aa9.45□□□□□ -0.9
LINC02539-201ENST00000411615 FSD2A1L4K1 749 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms