RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ASB16Q96NS5 453 aa15.59■□□□□ 0.09
HLA-DQB2-229ENST00000411527 FAM126AQ9BYI3 521 aaPredicted RBP15.59■□□□□ 0.09
HLA-DQB2-229ENST00000411527 PRMT8Q9NR22 394 aaPredicted RBP15.59■□□□□ 0.09
HLA-DQB2-229ENST00000411527 CNTN3Q9P232 1028 aa15.59■□□□□ 0.09
HLA-DQB2-229ENST00000411527 NOL7Q9UMY1 257 aaKnown RBP15.59■□□□□ 0.09
HLA-DQB2-229ENST00000411527 RBM19Q9Y4C8 960 aaKnown RBP15.59■□□□□ 0.09
HLA-DQB2-229ENST00000411527 GPR179Q6PRD1 2367 aa15.59■□□□□ 0.09
HLA-DQB2-229ENST00000411527 ABLIM1O14639 778 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MYL4P12829 197 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PSMC3P17980 439 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SDHBP21912 280 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PROZP22891 400 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 GDI1P31150 447 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MCM4P33991 863 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 VIPR2P41587 438 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TRAPPC10P48553 1259 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ATXN1P54253 815 aaKnown RBP15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TWF1Q12792 350 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ZNF280DQ6N043 979 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MPZL3Q6UWV2 235 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 VITQ6UXI7 678 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ZNF687Q8N1G0 1237 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 APPL2Q8NEU8 664 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 FBXO18Q8NFZ0 1043 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SMARCD2Q92925 531 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ZBTB45Q96K62 511 aaPredicted RBP15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SUSD3Q96L08 255 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 DRC1Q96MC2 740 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 LMAN1LQ9HAT1 526 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ZNF334Q9HCZ1 680 aaPredicted RBP15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CEP72Q9P209 647 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ARHGAP28Q9P2N2 729 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 STK24Q9Y6E0 443 aa15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PDCD11Q14690 1871 aaKnown RBP15.58■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SFI1A8K8P3 1242 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PRR5-ARHGAP8B1AHC4 643 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SLC16A4O15374 487 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MEFVO15553 781 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MOSPD3O75425 235 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CPB1P15086 417 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 GJA1P17302 382 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MARCKSP29966 332 aaPredicted RBP15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 NRLP54845 237 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ARHGAP8P85298 464 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PTGDRQ13258 359 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SEZ6Q53EL9 994 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 RINT1Q6NUQ1 792 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MAP4K3Q8IVH8 894 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 IGSF22Q8N9C0 903 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 FAM3CQ92520 227 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 DDX12PQ92771 950 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TBC1D32Q96NH3 1257 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 LLPHQ9BRT6 129 aaKnown RBP15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 RUSC1Q9BVN2 902 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 RAB34Q9BZG1 259 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CHRDQ9H2X0 955 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TRPV5Q9NQA5 729 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 AFF4Q9UHB7 1163 aaKnown RBP15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 GMEB2Q9UKD1 530 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 USP18Q9UMW8 372 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 LIMCH1Q9UPQ0 1083 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PIAS3Q9Y6X2 628 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 COL4A2P08572 1712 aa15.57■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MYH11P35749 1972 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PP2D1A8MPX8 630 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ZNF263O14978 683 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CDC25AP30304 524 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 LMNB2Q03252 620 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MAPK7Q13164 816 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PPP2R5DQ14738 602 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SLC10A6Q3KNW5 377 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 KRT79Q5XKE5 535 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 RNF19BQ6ZMZ0 732 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MAMSTRQ6ZN01 415 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 C1orf186Q6ZWK4 172 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 LEMD2Q8NC56 503 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ZSCAN18Q8TBC5 510 aaPredicted RBP15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 DEPDC1BQ8WUY9 529 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 C17orf75Q9HAS0 396 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ASAH2Q9NR71 780 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 ANKFY1Q9P2R3 1169 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 CDV3Q9UKY7 258 aaKnown RBP15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MAFFQ9ULX9 164 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 PCDHB8Q9UN66 801 aa15.56■□□□□ 0.08
HLA-DQB2-229ENST00000411527 F5P12259 2224 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TDGF1P13385 188 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TGM1P22735 817 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TOB1P50616 345 aaPredicted RBP15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 EPHA5P54756 1037 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 RAD51AP2Q09MP3 1159 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 STRN3Q13033 797 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TEAD2Q15562 447 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 LPAL2Q16609 132 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 MFSD6LQ8IWD5 586 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 FAM184AQ8NB25 1140 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 NTPCRQ9BSD7 190 aaKnown RBP15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 IER2Q9BTL4 223 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 SLITRK6Q9H5Y7 841 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TRPV4Q9HBA0 871 aa15.55■□□□□ 0.08
HLA-DQB2-229ENST00000411527 TUBGCP4Q9UGJ1 667 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms