RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 OTOGLQ3ZCN5 2332 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 CACNA1IQ9P0X4 2223 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 PRR5-ARHGAP8B1AHC4 643 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 E9PMD0 336 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 HARSP12081 509 aaKnown RBP18.27■□□□□ 0.52
MRPL55-220ENST00000411464 PSMC3P17980 439 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 GDI1P31150 447 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 ARHGAP8P85298 464 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 LMNB2Q03252 620 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 STRN3Q13033 797 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 KRT79Q5XKE5 535 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 TAS1R3Q7RTX0 852 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 FAM184AQ8NB25 1140 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 LEMD2Q8NC56 503 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 FAM3CQ92520 227 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 SUSD3Q96L08 255 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 C17orf75Q9HAS0 396 aa18.27■□□□□ 0.52
MRPL55-220ENST00000411464 AFF4Q9UHB7 1163 aaKnown RBP18.27■□□□□ 0.52
MRPL55-220ENST00000411464 GPR179Q6PRD1 2367 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 COL4A3Q01955 1670 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 SHISA7A6NL88 538 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 MYL4P12829 197 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 PROZP22891 400 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 CCR2P41597 374 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 HMGN5P82970 282 aaKnown RBP18.26■□□□□ 0.51
MRPL55-220ENST00000411464 TWF1Q12792 350 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 PTGDRQ13258 359 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 NBR1Q14596 966 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 MAMSTRQ6ZN01 415 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 MAP4K3Q8IVH8 894 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 HS6ST3Q8IZP7 471 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 DAW1Q8N136 415 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 IGSF22Q8N9C0 903 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 DEPDC1BQ8WUY9 529 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 ZSWIM3Q96MP5 696 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 TBC1D32Q96NH3 1257 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 IER2Q9BTL4 223 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 RUSC1Q9BVN2 902 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 CHRDQ9H2X0 955 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 LMAN1LQ9HAT1 526 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 ZNF334Q9HCZ1 680 aaPredicted RBP18.26■□□□□ 0.51
MRPL55-220ENST00000411464 TRPV5Q9NQA5 729 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 ASAH2Q9NR71 780 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 KCNG1Q9UIX4 513 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 GMEB2Q9UKD1 530 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 RAB23Q9ULC3 237 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 DOCK6Q96HP0 2047 aa18.26■□□□□ 0.51
MRPL55-220ENST00000411464 SFI1A8K8P3 1242 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 ZNF263O14978 683 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 SLC16A4O15374 487 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 TOM1L1O75674 476 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 CPB1P15086 417 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 RINT1Q6NUQ1 792 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 VITQ6UXI7 678 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 DDX12PQ92771 950 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 ZBTB45Q96K62 511 aaPredicted RBP18.25■□□□□ 0.51
MRPL55-220ENST00000411464 NTPCRQ9BSD7 190 aaKnown RBP18.25■□□□□ 0.51
MRPL55-220ENST00000411464 GPR88Q9GZN0 384 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 SLITRK6Q9H5Y7 841 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 CEP72Q9P209 647 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 ANKFY1Q9P2R3 1169 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 CDV3Q9UKY7 258 aaKnown RBP18.25■□□□□ 0.51
MRPL55-220ENST00000411464 USP18Q9UMW8 372 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 PCDHB8Q9UN66 801 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 PIAS3Q9Y6X2 628 aa18.25■□□□□ 0.51
MRPL55-220ENST00000411464 MYH15Q9Y2K3 1946 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 ABLIM1O14639 778 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 VIPR2P41587 438 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 CCR3P51677 355 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 SMTNP53814 917 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 ATXN1P54253 815 aaKnown RBP18.24■□□□□ 0.51
MRPL55-220ENST00000411464 SLC10A6Q3KNW5 377 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 RNF19BQ6ZMZ0 732 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 C1orf186Q6ZWK4 172 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 ZNF687Q8N1G0 1237 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 CELF5Q8N6W0 485 aaKnown RBP18.24■□□□□ 0.51
MRPL55-220ENST00000411464 ZSCAN18Q8TBC5 510 aaPredicted RBP18.24■□□□□ 0.51
MRPL55-220ENST00000411464 E2F7Q96AV8 911 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 TIPINQ9BVW5 301 aa18.24■□□□□ 0.51
MRPL55-220ENST00000411464 PP2D1A8MPX8 630 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 LAD1O00515 517 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 NRG2O14511 850 aaPredicted RBP18.23■□□□□ 0.51
MRPL55-220ENST00000411464 CLDN3O15551 220 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 GJA1P17302 382 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 MATR3P43243 847 aaKnown RBP eCLIP18.23■□□□□ 0.51
MRPL55-220ENST00000411464 EPHA5P54756 1037 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 YWHAHQ04917 246 aaPredicted RBP18.23■□□□□ 0.51
MRPL55-220ENST00000411464 MAPK7Q13164 816 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 NOLC1Q14978 699 aaKnown RBP eCLIP18.23■□□□□ 0.51
MRPL55-220ENST00000411464 SEZ6Q53EL9 994 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 DTHD1Q6ZMT9 781 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 MFSD6LQ8IWD5 586 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 YAF2Q8IY57 180 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 OXCT2Q9BYC2 517 aaPredicted RBP18.23■□□□□ 0.51
MRPL55-220ENST00000411464 TRPV4Q9HBA0 871 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 PCDHB6Q9Y5E3 794 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 VWA8A3KMH1 1905 aa18.23■□□□□ 0.51
MRPL55-220ENST00000411464 MEFVO15553 781 aaPredicted RBP18.22■□□□□ 0.51
MRPL55-220ENST00000411464 MOSPD3O75425 235 aa18.22■□□□□ 0.51
MRPL55-220ENST00000411464 NEFLP07196 543 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms