RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CLYBLQ8N0X4 340 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 TMEM143Q96AN5 459 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 EIF2AK1Q9BQI3 630 aaKnown RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 SPACA6W5XKT8 324 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 TEX28O15482 410 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 CKBP12277 381 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 VCLP18206 1134 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 MRPS15P82914 257 aaKnown RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 RPAINQ86UA6 219 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 ADAMTS1Q9UHI8 967 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 PLAAQ9Y263 795 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 CHD4Q14839 1912 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 LRRIQ3A6PVS8 624 aaPredicted RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 CYP2E1P05181 493 aaPredicted RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 MMEP08473 750 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 HUNKP57058 714 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 COPS7BQ9H9Q2 264 aaPredicted RBP11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 SPHKAPQ2M3C7 1700 aa11.79□□□□□ -0.52
PRPF40A-202ENST00000410080 TRIM49BA6NDI0 452 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 PCYT1AP49585 367 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 KRT76Q01546 638 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 DGKDQ16760 1214 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 FOXR1Q6PIV2 292 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 GPD1LQ8N335 351 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 ARHGEF3Q9NR81 526 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 MCM8Q9UJA3 840 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 PRR36Q9H6K5 1346 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 CCL15-CCL14A0A0B4J2E2 113 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 GTF2E2P29084 291 aaKnown RBP11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 ZNF211Q13398 564 aaPredicted RBP11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 POLD3Q15054 466 aaPredicted RBP11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 CCL15Q16663 113 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 DCAF6Q58WW2 860 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 KCNV1Q6PIU1 500 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 RD3Q7Z3Z2 195 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 ALG13Q9NP73 1137 aaKnown RBP11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 DDX56Q9NY93 547 aaKnown RBP11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 EHD2Q9NZN4 543 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 RAB23Q9ULC3 237 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 PCNAP12004 261 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 YWHAZP63104 245 aaKnown RBP11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 APBA1Q02410 837 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 KRT31Q15323 416 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 RCSD1Q6JBY9 416 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 CINPQ9BW66 212 aaPredicted RBP11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 YY1AP1Q9H869 796 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 KRCC1Q9NPI7 259 aaPredicted RBP11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 NDE1Q9NXR1 346 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 STAP2Q9UGK3 403 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 SCARF1Q14162 830 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 KLHL38Q2WGJ6 581 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 SH2D3AQ9BRG2 576 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 NR1D1P20393 614 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 ACOT2P49753 483 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 ARSEP51690 589 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 LUZP2Q86TE4 346 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 ADCK1Q86TW2 530 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 CCDC60Q8IWA6 550 aaPredicted RBP11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 INPP5DQ92835 1189 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 BBS2Q9BXC9 721 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 CD209Q9NNX6 404 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 NMRK2Q9NPI5 230 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 RPS6KB2Q9UBS0 482 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 CDC42BPBQ9Y5S2 1711 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 A0A087X0T9 212 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 ZC3H11AO75152 810 aaKnown RBP eCLIP11.78□□□□□ -0.522e-14■■□□□ 12.8
PRPF40A-202ENST00000410080 TFDP2Q14188 446 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 ARHGAP17Q68EM7 881 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 FBXO10Q9UK96 956 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 AGAP1Q9UPQ3 857 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 N6AMT1Q9Y5N5 214 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 SNX9Q9Y5X1 595 aa11.78□□□□□ -0.52
PRPF40A-202ENST00000410080 CTIFO43310 598 aaKnown RBP11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 FTLP02792 175 aaPredicted RBP11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 ERFP50548 548 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 AP1ARQ63HQ0 302 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 KIAA2013Q8IYS2 634 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 MIER2Q8N344 545 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 CARNMT1Q8N4J0 409 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 AFDNP55196 1824 aaKnown RBP11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 NPHP3-ACAD11A0A0J9YXS1 232 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 PRKCBP05771 671 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 GAS2L3Q86XJ1 694 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 TMEM169Q96HH4 297 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 MXD3Q9BW11 206 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 TMEM60Q9H2L4 133 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 FHOD1Q9Y613 1164 aa11.77□□□□□ -0.52
PRPF40A-202ENST00000410080 H2AFYO75367 372 aaKnown RBP11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 PGK2P07205 417 aa11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 NCAM1P13591 858 aa11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 ALOX15P16050 662 aaPredicted RBP11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 SFSWAPQ12872 951 aaKnown RBP11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 LRRC8BQ6P9F7 803 aa11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 CDKL3Q8IVW4 592 aaPredicted RBP11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 ENDOD1O94919 500 aa11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 TRIM16O95361 564 aa11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 ASS1P00966 412 aaKnown RBP11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 AP3B2Q13367 1082 aa11.77□□□□□ -0.53
PRPF40A-202ENST00000410080 ANGEL2Q5VTE6 544 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms