RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 XYLBO75191 536 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 ABLIM3O94929 683 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 IDEP14735 1019 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 ACOT2P49753 483 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 POU5F1Q01860 360 aaKnown RBP21.31■■□□□ 1
TSPAN4-209ENST00000409543 ROR1Q01973 937 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 TDGQ13569 410 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 POSTNQ15063 836 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 L1TD1Q5T7N2 865 aaKnown RBP21.31■■□□□ 1
TSPAN4-209ENST00000409543 SPATA1Q5VX52 437 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 ATL3Q6DD88 541 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 GRASPQ7Z6J2 395 aaPredicted RBP21.31■■□□□ 1
TSPAN4-209ENST00000409543 SUGP1Q8IWZ8 645 aaKnown RBP21.31■■□□□ 1
TSPAN4-209ENST00000409543 FAM122AQ96E09 287 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 FAM212AQ96EL1 285 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 ACCSQ96QU6 501 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 LRRC27Q9C0I9 530 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 SMOC2Q9H3U7 446 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 CUEDC2Q9H467 287 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 PANK4Q9NVE7 773 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 TBC1D7Q9P0N9 293 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 FBXL5Q9UKA1 691 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 EXOC7Q9UPT5 735 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 DERAQ9Y315 318 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 PCDHB13Q9Y5F0 798 aa21.31■■□□□ 1
TSPAN4-209ENST00000409543 M0QZQ0 153 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 CCL16O15467 120 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 FSHRP23945 695 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 AARSP49588 968 aaKnown RBP eCLIP21.3■■□□□ 18e-6■■■■■ 52.4
TSPAN4-209ENST00000409543 ALCAMQ13740 583 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 E2F4Q16254 413 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 CTXN3Q4LDR2 81 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 JADE1Q6IE81 842 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 SHC4Q6S5L8 630 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 TMEM130Q8N3G9 435 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 BEST2Q8NFU1 509 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 KCNG4Q8TDN1 519 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 POMGNT1Q8WZA1 660 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 NXPE3Q969Y0 559 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 TNMDQ9H2S6 317 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 IKZF4Q9H2S9 585 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 ASB7Q9H672 318 aa21.3■■□□□ 1
TSPAN4-209ENST00000409543 DOCK8Q8NF50 2099 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 WDR27A2RRH5 827 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 GCNT3O95395 438 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 LAMP2P13473 410 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 ADSSP30520 456 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 KCNA1Q09470 495 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 ZNF280DQ6N043 979 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 GET4Q7L5D6 327 aaPredicted RBP21.29■■□□□ 1
TSPAN4-209ENST00000409543 CCDC65Q8IXS2 484 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 KBTBD4Q9NVX7 518 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 POLIQ9UNA4 740 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 ZFP37Q9Y6Q3 630 aaPredicted RBP21.29■■□□□ 1
TSPAN4-209ENST00000409543 MUC6Q6W4X9 2439 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 ZDBF2Q9HCK1 2354 aa21.29■■□□□ 1
TSPAN4-209ENST00000409543 NFICP08651 508 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 ATF2P15336 505 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 PAX3P23760 479 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 ELF1P32519 619 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 GUCY2FP51841 1108 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 CASP5P51878 434 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 ARPP19P56211 112 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 NTHL1P78549 312 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 PKP1Q13835 747 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 TMEM132DQ14C87 1099 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 FOXD4L6Q3SYB3 417 aaPredicted RBP21.28■■□□□ 1
TSPAN4-209ENST00000409543 TPGS2Q68CL5 300 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 CRELD2Q6UXH1 353 aaPredicted RBP21.28■■□□□ 1
TSPAN4-209ENST00000409543 FOXD4L3Q6VB84 417 aaPredicted RBP21.28■■□□□ 1
TSPAN4-209ENST00000409543 IQUBQ8NA54 791 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 SPRYD3Q8NCJ5 442 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 OXCT2Q9BYC2 517 aaPredicted RBP21.28■■□□□ 1
TSPAN4-209ENST00000409543 CFAP45Q9UL16 551 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 C2CD2Q9Y426 696 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 DOCK6Q96HP0 2047 aa21.28■■□□□ 1
TSPAN4-209ENST00000409543 ARHGEF37A1IGU5 675 aa21.27■■□□□ 1
TSPAN4-209ENST00000409543 OAZ2O95190 189 aa21.27■■□□□ 1
TSPAN4-209ENST00000409543 AMPD3Q01432 767 aa21.27■■□□□ 1
TSPAN4-209ENST00000409543 YWHAHQ04917 246 aaPredicted RBP21.27■■□□□ 1
TSPAN4-209ENST00000409543 DSTYKQ6XUX3 929 aa21.27■■□□□ 1
TSPAN4-209ENST00000409543 TCEAL8Q8IYN2 117 aa21.27■■□□□ 1
TSPAN4-209ENST00000409543 DHX58Q96C10 678 aa21.27■■□□□ 1
TSPAN4-209ENST00000409543 CDH7Q9ULB5 785 aa21.27■■□□□ 1
TSPAN4-209ENST00000409543 MAFFQ9ULX9 164 aa21.27■■□□□ 1
TSPAN4-209ENST00000409543 DUSP12Q9UNI6 340 aa21.27■■□□□ 1
TSPAN4-209ENST00000409543 ANO9A1A5B4 782 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 PIRO00625 290 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 PRRG1O14668 218 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 PPEF2O14830 753 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 PDGFBP01127 241 aaPredicted RBP21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 GARTP22102 1010 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 LILRA4P59901 499 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 C9orf57Q5W0N0 161 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 CNNM4Q6P4Q7 775 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 SYCP3Q8IZU3 236 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 SLC44A3Q8N4M1 653 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 RSAD2Q8WXG1 361 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 FGFBP2Q9BYJ0 223 aa21.26■□□□□ 0.99
TSPAN4-209ENST00000409543 TRIM9Q9C026 710 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms