RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 DAGLBQ8NCG7 672 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 TEX12Q9BXU0 123 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 SLC13A1Q9BZW2 595 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 SENP2Q9HC62 589 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 PRG3Q9Y2Y8 225 aaPredicted RBP26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 CEP170BQ9Y4F5 1589 aaPredicted RBP26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 PDCD2Q16342 344 aaPredicted RBP26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 FAM47EQ6ZV65 393 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 NUDCD3Q8IVD9 361 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 PCSK9Q8NBP7 692 aaKnown RBP26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 USP33Q8TEY7 942 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 THOC1Q96FV9 657 aaKnown RBP26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 TMEM169Q96HH4 297 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 FOPNLQ96NB1 174 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 TARS2Q9BW92 718 aaKnown RBP26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 ZC3H13Q5T200 1668 aaKnown RBP26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 MSH4O15457 936 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 ATICP31939 592 aa26.36■■□□□ 1.81
SPIRE1-202ENST00000409402 HIST1H2AGP0C0S8 130 aaPredicted RBP26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 HIST1H2ADP20671 130 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 TDRD10Q5VZ19 366 aaKnown RBP26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 BTBD6Q96KE9 485 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 HIST1H2AHQ96KK5 128 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 HIST1H2AJQ99878 128 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 H2AFJQ9BTM1 129 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 DIP2BQ9P265 1576 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 CYP11B2P19099 503 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 AKT1P31749 480 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 BFSP2Q13515 415 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 LCA5Q86VQ0 697 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 MFN1Q8IWA4 741 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 NAGPAQ9UK23 515 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 SLC26A7Q8TE54 656 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 EML4Q9HC35 981 aaKnown RBP26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 HDAC6Q9UBN7 1215 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 DOLKQ9UPQ8 538 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 E2F6O75461 281 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 FAM200BP0CF97 657 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 RASIP1Q5U651 963 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 TRAPPC11Q7Z392 1133 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 AGAP3Q96P47 875 aa26.35■■□□□ 1.81
SPIRE1-202ENST00000409402 H7C4K7 107 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 ANKS3Q6ZW76 656 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 TBX20Q9UMR3 447 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 FOXP2O15409 715 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 HOXA2O43364 376 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 TRPA1O75762 1119 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 WEE2P0C1S8 567 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 NCAPHQ15003 741 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 DNAJC8O75937 253 aaPredicted RBP26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 C10orf120Q5SQS8 335 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 SCFD1Q8WVM8 642 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 KRT35Q92764 455 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 SYF2O95926 243 aaKnown RBP26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 RPLP2P05387 115 aaKnown RBP26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 VEGFAP15692 232 aaPredicted RBP26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 GALCP54803 685 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 DDIASQ8IXT1 998 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 TMEM117Q9H0C3 514 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 SYNDIG1Q9H7V2 258 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 COG4Q9H9E3 785 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 SLC30A1Q9Y6M5 507 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 KCNA2P16389 499 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 EHD4Q9H223 541 aa26.34■■□□□ 1.81
SPIRE1-202ENST00000409402 SSU72P8A0A1W2PR75 194 aa26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 DIAPH2O60879 1101 aa26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 MAGOHP61326 146 aaKnown RBP26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 ZNF677Q86XU0 584 aa26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 A0A1B0GTH6 734 aa26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 BRAFP15056 766 aa26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 DPP3Q9NY33 737 aa26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 INTUQ9ULD6 942 aa26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 RIMS1Q86UR5 1692 aaKnown RBP26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 ESYT3A0FGR9 886 aa26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 NFIAQ12857 509 aa26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 EFTUD2Q15029 972 aaKnown RBP eCLIP26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 DCAF6Q58WW2 860 aa26.33■■□□□ 1.81
SPIRE1-202ENST00000409402 GRAP2O75791 330 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 ITGB3P05106 788 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 MEI1Q5TIA1 1274 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 GPAT2Q6NUI2 795 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 CLMNQ96JQ2 1002 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 PCDHGB4Q9UN71 923 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 GPD1P21695 349 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 ARL4DP49703 201 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 PDAP1Q13442 181 aaKnown RBP26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 ATXN7L3BQ96GX2 97 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 INO80Q9ULG1 1556 aaPredicted RBP26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 C2CD2LO14523 706 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 TLR2O60603 784 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 PGK2P07205 417 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 CCDC144BQ3MJ40 725 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 CHSY1Q86X52 802 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 GMCL1P1Q8NEA9 526 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 UBA3Q8TBC4 463 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 TEKT4Q8WW24 435 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 OPTNQ96CV9 577 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 ARHGEF26Q96DR7 871 aa26.32■■□□□ 1.8
SPIRE1-202ENST00000409402 ZFP69BQ9UJL9 534 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms