RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SLC38A7Q9NVC3 462 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 COLQQ9Y215 455 aaPredicted RBP15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 DERAQ9Y315 318 aa15.21■□□□□ 0.03
CHRNA1-204ENST00000409323 NLRC5Q86WI3 1866 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 NRP1O14786 923 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 KIF4AO95239 1232 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 BRCC3P46736 316 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 UBASH3AP57075 661 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 UBXN1Q04323 297 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 TRPC3Q13507 836 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 NCOA4Q13772 614 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 UPP1Q16831 310 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 FAM43BQ6ZT52 329 aaPredicted RBP15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 FIBCD1Q8N539 461 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 BCL7CQ8WUZ0 217 aaPredicted RBP15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 PBX4Q9BYU1 374 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 NKX2-4Q9H2Z4 354 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 PRO3102Q9H379 93 aa15.2■□□□□ 0.02
CHRNA1-204ENST00000409323 LGALS16A8MUM7 142 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 SPTLC1O15269 473 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 XPOTO43592 962 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 B3GAT3O94766 335 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 GALTP07902 379 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 TPM2P07951 284 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 SLC9A1P19634 815 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 SCARA5Q6ZMJ2 495 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 C17orf80Q9BSJ5 609 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 XPO4Q9C0E2 1151 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 GCNT4Q9P109 453 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 ITGA11Q9UKX5 1188 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 POLIQ9UNA4 740 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 FAN1Q9Y2M0 1017 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 ANO9A1A5B4 782 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 LINC01553A4QN01 128 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 STX10O60499 249 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 LINC00271P0C7V0 271 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 GTF2H1P32780 548 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 EPC2Q52LR7 807 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 GJB7Q6PEY0 223 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 KCNT2Q6UVM3 1135 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 CD300LGQ6UXG3 332 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 NT5DC4Q86YG4 428 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 COLGALT1Q8NBJ5 622 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 FBXL13Q8NEE6 735 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 TATDN2Q93075 761 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 HPDLQ96IR7 371 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 B3GALT6Q96L58 329 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 APOBEC3GQ9HC16 384 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 RTN4Q9NQC3 1192 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 MARCH5Q9NX47 278 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 RAB20Q9NX57 234 aa15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 NXF1Q9UBU9 619 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 R3HCC1Q9Y3T6 440 aaKnown RBP15.19■□□□□ 0.02
CHRNA1-204ENST00000409323 A0A1B0GTH6 734 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 LRRC10BA6NIK2 292 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 PIRO00625 290 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 ALDH2P05091 517 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 CYP3A5P20815 502 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 LRPAP1P30533 357 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 ALDH7A1P49419 539 aaKnown RBP15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 AP3M2P53677 418 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 MCCD1P59942 119 aaPredicted RBP15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 RBP5P82980 135 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 KCNMA1Q12791 1236 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 ZNF699Q32M78 642 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 GPIHBP1Q8IV16 184 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 SP7Q8TDD2 431 aaPredicted RBP15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 PCMTD1Q96MG8 357 aaPredicted RBP15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 TRIM5Q9C035 493 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 INTS2Q9H0H0 1204 aaKnown RBP15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 XYLT2Q9H1B5 865 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 NUB1Q9Y5A7 615 aa15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 TIMM13Q9Y5L4 95 aaPredicted RBP15.18■□□□□ 0.02
CHRNA1-204ENST00000409323 PLXNA4Q9HCM2 1894 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 CTNNB1P35222 781 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 RAP1GAPP47736 663 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 CDR1P51861 262 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 SYCP1Q15431 976 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 EXOC3L4Q17RC7 722 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 FILIP1LQ4L180 1135 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 FKBP15Q5T1M5 1219 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 ARHGEF19Q8IW93 802 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 LMO3Q8TAP4 145 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 ZNF558Q96NG5 402 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 LSM14BQ9BX40 385 aaKnown RBP15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 SNX9Q9Y5X1 595 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 TRIOBPQ9H2D6 2365 aa15.17■□□□□ 0.02
CHRNA1-204ENST00000409323 EPHB6O15197 1021 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 N4BP1O75113 896 aaKnown RBP15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 TADA2AO75478 443 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 PON1P27169 355 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 LILRA4P59901 499 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 NOP14P78316 857 aaKnown RBP15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 ENPEPQ07075 957 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 NR1I3Q14994 352 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 WDR72Q3MJ13 1102 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 TIGD5Q53EQ6 642 aa15.16■□□□□ 0.02
CHRNA1-204ENST00000409323 GBP6Q6ZN66 633 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms