RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 EXOC3L4Q17RC7 722 aa22.06■■□□□ 1.12
VSX1-203ENST00000409285 ZNF280BQ86YH2 543 aa22.06■■□□□ 1.12
VSX1-203ENST00000409285 NRDE2Q9H7Z3 1164 aa22.06■■□□□ 1.12
VSX1-203ENST00000409285 GOLGA2P5Q9HBQ8 144 aa22.06■■□□□ 1.12
VSX1-203ENST00000409285 TRANK1O15050 2925 aa22.06■■□□□ 1.12
VSX1-203ENST00000409285 PLXNA4Q9HCM2 1894 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 TMEM189-UBE2V1I3L0A0 370 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 PHACTR2O75167 634 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 ASS1P00966 412 aaKnown RBP22.05■■□□□ 1.12
VSX1-203ENST00000409285 POLR2BP30876 1174 aaKnown RBP22.05■■□□□ 1.12
VSX1-203ENST00000409285 PBX1P40424 430 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 PNPLA4P41247 253 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 GUCY2FP51841 1108 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 BTG3Q14201 252 aaPredicted RBP22.05■■□□□ 1.12
VSX1-203ENST00000409285 MRFAP1L1Q96HT8 127 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 FAXDC2Q96IV6 333 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 ZNF560Q96MR9 790 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 FAM193BQ96PV7 902 aaPredicted RBP22.05■■□□□ 1.12
VSX1-203ENST00000409285 XYLT2Q9H1B5 865 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 CWH43Q9H720 699 aa22.05■■□□□ 1.12
VSX1-203ENST00000409285 TULP1O00294 542 aaPredicted RBP22.04■■□□□ 1.12
VSX1-203ENST00000409285 TEX33O43247 280 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 CST3P01034 146 aaPredicted RBP22.04■■□□□ 1.12
VSX1-203ENST00000409285 CLCNKBP51801 687 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 KCNMA1Q12791 1236 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 TRPC3Q13507 836 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 SGSM1Q2NKQ1 1148 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 FAM117BQ6P1L5 589 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 TRIM65Q6PJ69 517 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 SEMA4DQ92854 862 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 ZBED2Q9BTP6 218 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 IMPG2Q9BZV3 1241 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 TRIM5Q9C035 493 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 SIK3Q9Y2K2 1263 aa22.04■■□□□ 1.12
VSX1-203ENST00000409285 CASTOR2A6NHX0 329 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 PODXLO00592 558 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 PON1P27169 355 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 MYO1EQ12965 1108 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 PAN2Q504Q3 1202 aaKnown RBP22.03■■□□□ 1.12
VSX1-203ENST00000409285 EHBP1Q8NDI1 1231 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 PLCB1Q9NQ66 1216 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 DNAJB4Q9UDY4 337 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 AGAP1Q9UPQ3 857 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 R3HCC1Q9Y3T6 440 aaKnown RBP22.03■■□□□ 1.12
VSX1-203ENST00000409285 ITIH6Q6UXX5 1313 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 TLL1O43897 1013 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 KRT19P08727 400 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 AARSP49588 968 aaKnown RBP eCLIP22.03■■□□□ 1.12
VSX1-203ENST00000409285 MYL6P60660 151 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 SYCP1Q15431 976 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 DPY19L2P1Q6NXN4 242 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 DCLRE1AQ6PJP8 1040 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 CCDC150Q8NCX0 1101 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 CLP1Q92989 425 aaKnown RBP22.03■■□□□ 1.12
VSX1-203ENST00000409285 PAAF1Q9BRP4 392 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 CRACR2AQ9BSW2 395 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 INTS2Q9H0H0 1204 aaKnown RBP22.03■■□□□ 1.12
VSX1-203ENST00000409285 DAAM1Q9Y4D1 1078 aa22.03■■□□□ 1.12
VSX1-203ENST00000409285 PPEF2O14830 753 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 LINC00271P0C7V0 271 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 LAG3P18627 525 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 RFX1P22670 979 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 TAF6P49848 677 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 ZNF75DP51815 510 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 NOP14P78316 857 aaKnown RBP22.02■■□□□ 1.12
VSX1-203ENST00000409285 PLCB2Q00722 1185 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 ZNF699Q32M78 642 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 SCARA3Q6AZY7 606 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 SMYD5Q6GMV2 418 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 TMEM130Q8N3G9 435 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 C3orf58Q8NDZ4 430 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 HPDLQ96IR7 371 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 FBXL5Q9UKA1 691 aa22.02■■□□□ 1.12
VSX1-203ENST00000409285 MRPL42Q9Y6G3 142 aaKnown RBP22.02■■□□□ 1.12
VSX1-203ENST00000409285 SLC9A1P19634 815 aa22.01■■□□□ 1.11
VSX1-203ENST00000409285 LILRA4P59901 499 aa22.01■■□□□ 1.11
VSX1-203ENST00000409285 SV2CQ496J9 727 aa22.01■■□□□ 1.11
VSX1-203ENST00000409285 WDR44Q5JSH3 913 aa22.01■■□□□ 1.11
VSX1-203ENST00000409285 FIBCD1Q8N539 461 aa22.01■■□□□ 1.11
VSX1-203ENST00000409285 SIX2Q9NPC8 291 aa22.01■■□□□ 1.11
VSX1-203ENST00000409285 GDAP2Q9NXN4 497 aa22.01■■□□□ 1.11
VSX1-203ENST00000409285 HCSTQ9UBK5 93 aa22.01■■□□□ 1.11
VSX1-203ENST00000409285 APEX2Q9UBZ4 518 aa22.01■■□□□ 1.11
VSX1-203ENST00000409285 PCDHA11Q9Y5I1 949 aa22.01■■□□□ 1.11
VSX1-203ENST00000409285 KIF4AO95239 1232 aa22■■□□□ 1.11
VSX1-203ENST00000409285 ALDH2P05091 517 aa22■■□□□ 1.11
VSX1-203ENST00000409285 GALTP07902 379 aa22■■□□□ 1.11
VSX1-203ENST00000409285 SLC11A1P49279 550 aa22■■□□□ 1.11
VSX1-203ENST00000409285 BCAR1P56945 870 aa22■■□□□ 1.11
VSX1-203ENST00000409285 FIGNQ5HY92 759 aa22■■□□□ 1.11
VSX1-203ENST00000409285 VSTM4Q8IW00 320 aa22■■□□□ 1.11
VSX1-203ENST00000409285 IQCDQ96DY2 449 aa22■■□□□ 1.11
VSX1-203ENST00000409285 FAM81BQ96LP2 452 aa22■■□□□ 1.11
VSX1-203ENST00000409285 NT5C1BQ96P26 610 aa22■■□□□ 1.11
VSX1-203ENST00000409285 FAM124BQ9H5Z6 455 aaPredicted RBP22■■□□□ 1.11
VSX1-203ENST00000409285 CACNG4Q9UBN1 327 aa22■■□□□ 1.11
VSX1-203ENST00000409285 NRP1O14786 923 aa21.99■■□□□ 1.11
VSX1-203ENST00000409285 LRRN2O75325 713 aa21.99■■□□□ 1.11
VSX1-203ENST00000409285 B3GAT3O94766 335 aa21.99■■□□□ 1.11
VSX1-203ENST00000409285 OR1G1P47890 313 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms