RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 EXTL3O43909 919 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 CCNT1O60563 726 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 USO1O60763 962 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 RPP40O75818 363 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 LYPLA2O95372 231 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 PDIA3P30101 505 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 MPLP40238 635 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 PXNP49023 591 aaPredicted RBP14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 NOVA1P51513 510 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 KPNA1P52294 538 aaPredicted RBP14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 EPHA5P54756 1037 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 ARPP19P56211 112 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 FCHO2Q0JRZ9 810 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 TEAD2Q15562 447 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 EEF1DP3Q658K8 133 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 RNF43Q68DV7 783 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 CACNA2D4Q7Z3S7 1137 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 TRIM22Q8IYM9 498 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 EIF2AK1Q9BQI3 630 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 ADAM33Q9BZ11 813 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 ANKEF1Q9NU02 776 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 AKAP13Q12802 2813 aa14.17□□□□□ -0.14
CHRNA1-203ENST00000409219 TRAPPC3O43617 180 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 DEXIO95424 95 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 MYL4P12829 197 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 SSRP1Q08945 709 aaKnown RBP14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 ZNF252P-AS1Q0IIN9 211 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 FOXC1Q12948 553 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 PON2Q15165 354 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 IQCEQ6IPM2 695 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 GALNT17Q6IS24 598 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 PKN3Q6P5Z2 889 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 BLOC1S2Q6QNY1 142 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 RALGPS2Q86X27 583 aaPredicted RBP14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 ELMOD1Q8N336 334 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 GATA6Q92908 595 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 CCDC43Q96MW1 224 aaKnown RBP14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 UROC1Q96N76 676 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 ADPGKQ9BRR6 497 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 EDEM2Q9BV94 578 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 SLITRK6Q9H5Y7 841 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 ASAH2Q9NR71 780 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 PCDHGA5Q9Y5G8 931 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 LAMA5O15230 3695 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 LOC400499M0QZD8 3231 aa14.16□□□□□ -0.14
CHRNA1-203ENST00000409219 DMXL2Q8TDJ6 3036 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 CCDC194A0A1B0GVG4 234 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 SRRM3A6NNA2 597 aaPredicted RBP14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 MARCH6O60337 910 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 CCDC192P0DO97 292 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 RPS6KB1P23443 525 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 SOX4Q06945 474 aaPredicted RBP14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 TWF1Q12792 350 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 PRPF4BQ13523 1007 aaKnown RBP14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 TMEM132AQ24JP5 1023 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 MAEAQ7L5Y9 396 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 ZBTB8OSQ8IWT0 167 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 YAF2Q8IY57 180 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 LEMD2Q8NC56 503 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 TTC8Q8TAM2 541 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 SHKBP1Q8TBC3 707 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 PIGOQ8TEQ8 1089 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 E2F7Q96AV8 911 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 ZNF512Q96ME7 567 aaPredicted RBP14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 HSD17B14Q9BPX1 270 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 CCDC113Q9H0I3 377 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 GTSE1Q9NYZ3 720 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 KCNJ14Q9UNX9 436 aa14.15□□□□□ -0.14
CHRNA1-203ENST00000409219 CCDC163A0A0D9SF12 145 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 TMEM8BA6NDV4 472 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 SOBPA7XYQ1 873 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 TOP3BO95985 862 aaKnown RBP14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 EVCP57679 992 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 TPGS2Q68CL5 300 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 SLFN12Q8IYM2 578 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 FAM177A1Q8N128 213 aaPredicted RBP14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 FAM200AQ8TCP9 573 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 BSNDQ8WZ55 320 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 KCNB2Q92953 911 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 VPS45Q9NRW7 570 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 FBXL5Q9UKA1 691 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 SNX14Q9Y5W7 946 aa14.14□□□□□ -0.15
CHRNA1-203ENST00000409219 ATG2BQ96BY7 2078 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 A0A087WWV3 80 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 SYN3O14994 580 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 RING1Q06587 406 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 MRPL58Q14197 206 aaKnown RBP14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 MAPK6Q16659 721 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 DCAF4L1Q3SXM0 396 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 STXBP5Q5T5C0 1151 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 PIK3AP1Q6ZUJ8 805 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 TMC8Q8IU68 726 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 SYNPOQ8N3V7 929 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 ZFYVE19Q96K21 471 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 ZC3H10Q96K80 434 aaKnown RBP14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 LRRC3BQ96PB8 259 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 C2orf40Q9H1Z8 148 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 DSPP15924 2871 aaKnown RBP14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 FREM2Q5SZK8 3169 aa14.13□□□□□ -0.15
CHRNA1-203ENST00000409219 A0A1W2PRU2 124 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms