RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 DNM3Q9UQ16 869 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 BACE2Q9Y5Z0 518 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 CDY1Q9Y6F8 540 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 SPAG17Q6Q759 2223 aa10.06□□□□□ -0.8
NIF3L1-203ENST00000409129 E9PMD0 336 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 I3L4J1 428 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 U2AF2P26368 475 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■□□□□ 9.2
NIF3L1-203ENST00000409129 BRCC3P46736 316 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 NPTX2P47972 431 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 TOB1P50616 345 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 PEX3P56589 373 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 OSTNP61366 133 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 CSTF1Q05048 431 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 SPEM2Q0P670 501 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 PTGDRQ13258 359 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 SNW1Q13573 536 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 PABPC1LQ4VXU2 614 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 SLC44A4Q53GD3 710 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 ERICH6BQ5W0A0 696 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 CEP120Q8N960 986 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 C3orf58Q8NDZ4 430 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 SNX29Q8TEQ0 813 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 CCDC94Q9BW85 323 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 MRPL4Q9BYD3 311 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 RAB34Q9BZG1 259 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 CDT1Q9H211 546 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 TOPORSQ9NS56 1045 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 SLC38A7Q9NVC3 462 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 SPATA6Q9NWH7 488 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 MTF2Q9Y483 593 aaPredicted RBP10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 RBM19Q9Y4C8 960 aaKnown RBP10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 PHLPP2Q6ZVD8 1323 aa10.05□□□□□ -0.8
NIF3L1-203ENST00000409129 NOTCH4Q99466 2003 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 AKAP13Q12802 2813 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 KANSL1LA0AUZ9 987 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 SNPHO15079 494 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 SPTLC1O15269 473 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 HIP1RO75146 1068 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 MCF2P10911 925 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 KCNE1P15382 129 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 PTPN2P17706 415 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 PFKPQ01813 784 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 PRKCQQ04759 706 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 SOX4Q06945 474 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 DMWDQ09019 674 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 DMP1Q13316 513 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 IL17AQ16552 155 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 ZNF568Q3ZCX4 644 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 KRT79Q5XKE5 535 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 SLC8B1Q6J4K2 584 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 RINT1Q6NUQ1 792 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 TAS1R3Q7RTX0 852 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 NPAS3Q8IXF0 933 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 DAW1Q8N136 415 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 ZNF461Q8TAF7 563 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 DRC1Q96MC2 740 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 ZMAT2Q96NC0 199 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 ACAP3Q96P50 834 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 KXD1Q9BQD3 176 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 TCHPQ9BT92 498 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 DDX23Q9BUQ8 820 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 TARS2Q9BW92 718 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 KMT5AQ9NQR1 393 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 AVENQ9NQS1 362 aaPredicted RBP10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 ARHGAP28Q9P2N2 729 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 MRPS23Q9Y3D9 190 aaKnown RBP10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 PCDHB6Q9Y5E3 794 aa10.04□□□□□ -0.8
NIF3L1-203ENST00000409129 ARHGEF37A1IGU5 675 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 SFI1A8K8P3 1242 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 PP2D1A8MPX8 630 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 H7C4K7 107 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 LAD1O00515 517 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 PODXLO00592 558 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 SLC30A4O14863 429 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 SYN3O14994 580 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 TBC1D4O60343 1298 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 GDF9O60383 454 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 ABLIM3O94929 683 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 LRG1P02750 347 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 RHOP08100 348 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 PROZP22891 400 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 CDC25AP30304 524 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 ELF1P32519 619 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 RPL9P32969 192 aaKnown RBP10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 PRPHP41219 470 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 ROR1Q01973 937 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 MAPK7Q13164 816 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 PDCD11Q14690 1871 aaKnown RBP10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 MLF2Q15773 248 aaPredicted RBP10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 DTHD1Q6ZMT9 781 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 C1orf186Q6ZWK4 172 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 GPR161Q8N6U8 529 aaKnown RBP10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 ING5Q8WYH8 240 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 MCRS1Q96EZ8 462 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 NTPCRQ9BSD7 190 aaKnown RBP10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 RUSC1Q9BVN2 902 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 BCO2Q9BYV7 579 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 OSBPL6Q9BZF3 934 aa10.03□□□□□ -0.8
NIF3L1-203ENST00000409129 EPC1Q9H2F5 836 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms