RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 KYAT1Q16773 422 aa20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 SV2BQ7L1I2 683 aa20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 SLC44A3Q8N4M1 653 aa20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 FAM212AQ96EL1 285 aa20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 TBC1D7Q9P0N9 293 aa20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 CPSF3Q9UKF6 684 aaKnown RBP20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 UBQLN1Q9UMX0 589 aaKnown RBP20.98■□□□□ 0.95
SMARCB1-204ENST00000407422 ACOT2P49753 483 aa20.97■□□□□ 0.95
SMARCB1-204ENST00000407422 TCF15Q12870 199 aa20.97■□□□□ 0.95
SMARCB1-204ENST00000407422 CTXN3Q4LDR2 81 aa20.97■□□□□ 0.95
SMARCB1-204ENST00000407422 FOXD4L5Q5VV16 416 aaPredicted RBP20.97■□□□□ 0.95
SMARCB1-204ENST00000407422 LINC00301Q8NCQ3 95 aa20.97■□□□□ 0.95
SMARCB1-204ENST00000407422 ITFG1Q8TB96 612 aa20.97■□□□□ 0.95
SMARCB1-204ENST00000407422 FOXD4L4Q8WXT5 416 aaPredicted RBP20.97■□□□□ 0.95
SMARCB1-204ENST00000407422 TFIP11Q9UBB9 837 aaKnown RBP20.97■□□□□ 0.95
SMARCB1-204ENST00000407422 DNMT3BQ9UBC3 853 aaKnown RBP20.97■□□□□ 0.95
SMARCB1-204ENST00000407422 H7C4K7 107 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 PPEF2O14830 753 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 PPP1R37O75864 691 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 CYP3A5P20815 502 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 ABCD1P33897 745 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 STAT6P42226 847 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 KCNA1Q09470 495 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 STK38Q15208 465 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 ADALQ6DHV7 355 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 JADE1Q6IE81 842 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 CCDC73Q6ZRK6 1079 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 PDILTQ8N807 584 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 TMEM105Q8N8V8 129 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 PCDHB8Q9UN66 801 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 TIMM13Q9Y5L4 95 aaPredicted RBP20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 ANHXE9PGG2 379 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 SEC24AO95486 1093 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 POU2F2P09086 479 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 HTR4Q13639 388 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 APPL2Q8NEU8 664 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 FGF13Q92913 245 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 RPP25Q9BUL9 199 aaKnown RBP20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 STRA6Q9BX79 667 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 MFSD1Q9H3U5 465 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 MRPL44Q9H9J2 332 aaKnown RBP20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 FBXL21Q9UKT6 434 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 CDH7Q9ULB5 785 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 STYXL1Q9Y6J8 313 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 NUMBLQ9Y6R0 609 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 SCN1AP35498 2009 aa20.96■□□□□ 0.95
SMARCB1-204ENST00000407422 M0QZQ0 153 aa20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 CFHP08603 1231 aa20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 NFICP08651 508 aa20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 ATF2P15336 505 aa20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 ADSSP30520 456 aa20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 AARSP49588 968 aaKnown RBP eCLIP20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 SPATA1Q5VX52 437 aa20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 RTL10Q7L3V2 364 aa20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 SIX5Q8N196 739 aa20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 FLCNQ8NFG4 579 aa20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 FGF14Q92915 247 aa20.95■□□□□ 0.94
SMARCB1-204ENST00000407422 ARHGEF37A1IGU5 675 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 PRRG1O14668 218 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 SPTLC2O15270 562 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 IDEP14735 1019 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 NPR3P17342 541 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 ELF1P32519 619 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 CASP5P51878 434 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 PABPC1LQ4VXU2 614 aaKnown RBP20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 CWF19L1Q69YN2 538 aaKnown RBP20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 ASTLQ6HA08 431 aaPredicted RBP20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 SLFN12LQ6IEE8 588 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 ZNF280DQ6N043 979 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 PARM1Q6UWI2 310 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 ALYREFQ86V81 257 aaKnown RBP20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 NXPE3Q969Y0 559 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 PHOX2BQ99453 314 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 PRRX2Q99811 253 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 FGFBP2Q9BYJ0 223 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 CYP4F11Q9HBI6 524 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 SEL1LQ9UBV2 794 aa20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 AGO2Q9UKV8 859 aaKnown RBP20.94■□□□□ 0.94
SMARCB1-204ENST00000407422 XPOTO43592 962 aaKnown RBP20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 GAP43P17677 238 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 PTPN5P54829 565 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 SLC5A9Q2M3M2 681 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 FOXD4L6Q3SYB3 417 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 CRELD2Q6UXH1 353 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 FOXD4L3Q6VB84 417 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 HSCBQ8IWL3 235 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 CD302Q8IX05 232 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 TCEAL8Q8IYN2 117 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 ING5Q8WYH8 240 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 HVCN1Q96D96 273 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 TSPAN18Q96SJ8 248 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 ZFP37Q9Y6Q3 630 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 OAZ2O95190 189 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 LRG1P02750 347 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 RHOP08100 348 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 SRFP11831 508 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 YWHAHQ04917 246 aaPredicted RBP20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 ADCY1Q08828 1119 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 TMEM132DQ14C87 1099 aa20.93■□□□□ 0.94
SMARCB1-204ENST00000407422 TPGS2Q68CL5 300 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms