RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 EDEM3Q9BZQ6 932 aa22.03■■□□□ 1.12
CHKB-201ENST00000406938 XYLT2Q9H1B5 865 aa22.03■■□□□ 1.12
CHKB-201ENST00000406938 AGAP1Q9UPQ3 857 aa22.03■■□□□ 1.12
CHKB-201ENST00000406938 KRT9P35527 623 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 RBP5P82980 135 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 ZBED6P86452 979 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 GRIK3Q13003 919 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 PPIGQ13427 754 aaKnown RBP eCLIP22.02■■□□□ 1.129e-8■■□□□ 12.8
CHKB-201ENST00000406938 RAPGEF1Q13905 1077 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 SGSM1Q2NKQ1 1148 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 RRAGAQ7L523 313 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 NPAS4Q8IUM7 802 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 TNS4Q8IZW8 715 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 TATDN2Q93075 761 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 UBE2TQ9NPD8 197 aaPredicted RBP22.02■■□□□ 1.12
CHKB-201ENST00000406938 DNAJC12Q9UKB3 198 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 R3HCC1Q9Y3T6 440 aaKnown RBP22.02■■□□□ 1.12
CHKB-201ENST00000406938 DAAM1Q9Y4D1 1078 aa22.02■■□□□ 1.12
CHKB-201ENST00000406938 PPEF2O14830 753 aa22.02■■□□□ 1.11
CHKB-201ENST00000406938 C9orf57Q5W0N0 161 aa22.02■■□□□ 1.11
CHKB-201ENST00000406938 ZNF397Q8NF99 534 aaPredicted RBP22.02■■□□□ 1.11
CHKB-201ENST00000406938 KAT5Q92993 513 aa22.02■■□□□ 1.11
CHKB-201ENST00000406938 ABHD10Q9NUJ1 306 aa22.02■■□□□ 1.11
CHKB-201ENST00000406938 ZMYND8Q9ULU4 1186 aaPredicted RBP22.02■■□□□ 1.11
CHKB-201ENST00000406938 NUB1Q9Y5A7 615 aa22.02■■□□□ 1.11
CHKB-201ENST00000406938 ANO9A1A5B4 782 aa22.01■■□□□ 1.11
CHKB-201ENST00000406938 LRRC53A6NM62 1247 aa22.01■■□□□ 1.11
CHKB-201ENST00000406938 NOMO2Q5JPE7 1267 aa22.01■■□□□ 1.11
CHKB-201ENST00000406938 ABI1Q8IZP0 508 aa22.01■■□□□ 1.11
CHKB-201ENST00000406938 URGCPQ8TCY9 931 aa22.01■■□□□ 1.11
CHKB-201ENST00000406938 TAF4BQ92750 862 aa22.01■■□□□ 1.11
CHKB-201ENST00000406938 SPAG5Q96R06 1193 aa22.01■■□□□ 1.11
CHKB-201ENST00000406938 RNF216Q9NWF9 866 aaPredicted RBP22.01■■□□□ 1.11
CHKB-201ENST00000406938 TTC3P53804 2025 aa22■■□□□ 1.11
CHKB-201ENST00000406938 EFCAB14O75071 495 aa22■■□□□ 1.11
CHKB-201ENST00000406938 BAIAP3O94812 1187 aa22■■□□□ 1.11
CHKB-201ENST00000406938 LRPAP1P30533 357 aa22■■□□□ 1.11
CHKB-201ENST00000406938 ATICP31939 592 aa22■■□□□ 1.11
CHKB-201ENST00000406938 GCNT1Q02742 428 aa22■■□□□ 1.11
CHKB-201ENST00000406938 PDXDC1Q6P996 788 aa22■■□□□ 1.11
CHKB-201ENST00000406938 C16orf59Q7L2K0 433 aa22■■□□□ 1.11
CHKB-201ENST00000406938 LRRC52Q8N7C0 313 aa22■■□□□ 1.11
CHKB-201ENST00000406938 DPF3Q92784 378 aa22■■□□□ 1.11
CHKB-201ENST00000406938 HPDLQ96IR7 371 aa22■■□□□ 1.11
CHKB-201ENST00000406938 KREMEN1Q96MU8 473 aa22■■□□□ 1.11
CHKB-201ENST00000406938 DNAJC7Q99615 494 aa22■■□□□ 1.11
CHKB-201ENST00000406938 ARID3AQ99856 593 aa22■■□□□ 1.11
CHKB-201ENST00000406938 CACNG4Q9UBN1 327 aa22■■□□□ 1.11
CHKB-201ENST00000406938 GTF3C5Q9Y5Q8 519 aaPredicted RBP22■■□□□ 1.11
CHKB-201ENST00000406938 F8VZ95 297 aa21.99■■□□□ 1.11
CHKB-201ENST00000406938 HOXA2O43364 376 aa21.99■■□□□ 1.11
CHKB-201ENST00000406938 GATMP50440 423 aa21.99■■□□□ 1.11
CHKB-201ENST00000406938 MFAP3P55082 362 aa21.99■■□□□ 1.11
CHKB-201ENST00000406938 JAM2P57087 298 aa21.99■■□□□ 1.11
CHKB-201ENST00000406938 WDR5P61964 334 aaKnown RBP21.99■■□□□ 1.11
CHKB-201ENST00000406938 ARHGAP44Q17R89 818 aa21.99■■□□□ 1.11
CHKB-201ENST00000406938 OTOP2Q7RTS6 562 aa21.99■■□□□ 1.11
CHKB-201ENST00000406938 STK33Q9BYT3 514 aa21.99■■□□□ 1.11
CHKB-201ENST00000406938 NIF3L1Q9GZT8 377 aa21.99■■□□□ 1.11
CHKB-201ENST00000406938 VRTNQ9H8Y1 702 aa21.99■■□□□ 1.11
CHKB-201ENST00000406938 CASTOR2A6NHX0 329 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 PIRO00625 290 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 STAU1O95793 577 aaKnown RBP21.98■■□□□ 1.11
CHKB-201ENST00000406938 AMHP03971 560 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 DEFB103AP81534 67 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 MYO1EQ12965 1108 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 TUSC3Q13454 348 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 CUL2Q13617 745 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 DRAP1Q14919 205 aaPredicted RBP21.98■■□□□ 1.11
CHKB-201ENST00000406938 WDR72Q3MJ13 1102 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 ZNF667Q5HYK9 610 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 OR8K1Q8NGG5 319 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 CASD1Q96PB1 797 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 PANX2Q96RD6 677 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 GPR88Q9GZN0 384 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 TBC1D13Q9NVG8 400 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 UPP2O95045 317 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 PNMA6AP0CW24 399 aaPredicted RBP21.98■■□□□ 1.11
CHKB-201ENST00000406938 TBXAS1P24557 533 aaPredicted RBP21.98■■□□□ 1.11
CHKB-201ENST00000406938 ASPAP45381 313 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 EPHB4P54760 987 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 E4F1Q66K89 784 aaPredicted RBP21.98■■□□□ 1.11
CHKB-201ENST00000406938 SCARA5Q6ZMJ2 495 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 ZNF365Q70YC5 407 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 ENOSF1Q7L5Y1 443 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 GPIHBP1Q8IV16 184 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 LRRC8AQ8IWT6 810 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 FAM81BQ96LP2 452 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 ZNF560Q96MR9 790 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 KANSL3Q9P2N6 904 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 NXF1Q9UBU9 619 aaKnown RBP21.98■■□□□ 1.11
CHKB-201ENST00000406938 MYO6Q9UM54 1294 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 POLIQ9UNA4 740 aa21.98■■□□□ 1.11
CHKB-201ENST00000406938 PODXLO00592 558 aa21.97■■□□□ 1.11
CHKB-201ENST00000406938 B4GALT3O60512 393 aa21.97■■□□□ 1.11
CHKB-201ENST00000406938 PNPLA4P41247 253 aa21.97■■□□□ 1.11
CHKB-201ENST00000406938 CLCNKBP51801 687 aa21.97■■□□□ 1.11
CHKB-201ENST00000406938 NUCKS1Q9H1E3 243 aaKnown RBP21.97■■□□□ 1.11
CHKB-201ENST00000406938 TDRD15B5MCY1 1934 aaKnown RBP21.96■■□□□ 1.11
CHKB-201ENST00000406938 TBKBP1A7MCY6 615 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms