RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 AKAP10O43572 662 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 CLASP2O75122 1294 aaKnown RBP12.63□□□□□ -0.39
SMCR8-201ENST00000406438 FAM107AO95990 144 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 KDSRQ06136 332 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 KLRC3Q07444 240 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 KRT35Q92764 455 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 RNPC3Q96LT9 517 aaKnown RBP12.63□□□□□ -0.39
SMCR8-201ENST00000406438 CYTH3O43739 400 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 NMT2O60551 498 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 UBE3AQ05086 875 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 CHMP1BQ7LBR1 199 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 STAMBPL1Q96FJ0 436 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 ZNF512Q96ME7 567 aaPredicted RBP12.63□□□□□ -0.39
SMCR8-201ENST00000406438 MLNP12872 115 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 OSBPL10Q9BXB5 764 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 HNRNPCP07910 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMCR8-201ENST00000406438 PTRHD1Q6GMV3 140 aaKnown RBP12.63□□□□□ -0.39
SMCR8-201ENST00000406438 ZNF668Q96K58 619 aaPredicted RBP12.63□□□□□ -0.39
SMCR8-201ENST00000406438 RBP5P82980 135 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 RUNX1T1Q06455 604 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 GAS2L3Q86XJ1 694 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 GSPT2Q8IYD1 628 aaKnown RBP12.63□□□□□ -0.39
SMCR8-201ENST00000406438 HARS2P49590 506 aaKnown RBP12.63□□□□□ -0.39
SMCR8-201ENST00000406438 BTNL9Q6UXG8 535 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 CYB5R4Q7L1T6 521 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 NLRP14Q86W24 1093 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 AGPAT1Q99943 283 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 BRD8Q9H0E9 1235 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 CD209Q9NNX6 404 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.63□□□□□ -0.39
SMCR8-201ENST00000406438 ERBB3P21860 1342 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 RNF17Q9BXT8 1623 aaKnown RBP12.63□□□□□ -0.39
SMCR8-201ENST00000406438 PRAMEF22A3QJZ6 481 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 CYP2D6P10635 497 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 STILQ15468 1287 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 CALML6Q8TD86 181 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 AGBL1Q96MI9 1066 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 WDR35Q9P2L0 1181 aa12.63□□□□□ -0.39
SMCR8-201ENST00000406438 SESN2P58004 480 aaPredicted RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 GUCY1A3Q02108 690 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 ANGPT1Q15389 498 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 ANKMY2Q8IV38 441 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 TSEN34Q9BSV6 310 aaKnown RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 OSBPL1AQ9BXW6 950 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 RAB6BQ9NRW1 208 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 KDM6AO15550 1401 aaPredicted RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 TOMM70O94826 608 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 IL18RAPO95256 599 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 ADRA2BP18089 450 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 NPEPPSP55786 919 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 TP53BP2Q13625 1128 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 NKX1-1Q15270 411 aaPredicted RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 UGT3A1Q6NUS8 523 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 GUF1Q8N442 669 aaKnown RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 SASH1O94885 1247 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 CYTH1Q15438 398 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 VPS37AQ8NEZ2 397 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 USP6NLQ92738 828 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 LRRC14Q15048 493 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 HLFQ16534 295 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 GLYCTKQ8IVS8 523 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 EME1Q96AY2 570 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 ASCC2Q9H1I8 757 aaPredicted RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 GID8Q9NWU2 228 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 PCSK7Q16549 785 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 STK33Q9BYT3 514 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 DDX47Q9H0S4 455 aaKnown RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 TRABDQ9H4I3 376 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 TMEM260Q9NX78 707 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 CACNA2D2Q9NY47 1150 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 CAB39Q9Y376 341 aaPredicted RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 MYO1CO00159 1063 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 WBP4O75554 376 aaKnown RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 FKBP9O95302 570 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 ZNF200P98182 395 aaPredicted RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 WDR72Q3MJ13 1102 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 TTC39BQ5VTQ0 682 aaPredicted RBP12.62□□□□□ -0.39
SMCR8-201ENST00000406438 FKBP9P1Q75LS8 142 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 THAP11Q96EK4 314 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 SLC25A13Q9UJS0 675 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 OVOS2A0A0G2JMS6 1433 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 OVOS2A0A0J9YW53 1432 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 OVOS2Q6IE36 1432 aa12.62□□□□□ -0.39
SMCR8-201ENST00000406438 PRDX5P30044 214 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 STAT5BP51692 787 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 CSTF3Q12996 717 aaKnown RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 TRIM48Q8IWZ4 208 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 PPCSQ9HAB8 311 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 SLC30A1Q9Y6M5 507 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 CASP1P29466 404 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 SOAT1P35610 550 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 PLA2G4AP47712 749 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 NCOA4Q13772 614 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 MDH1BQ5I0G3 518 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 MCEEQ96PE7 176 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 GPR63Q9BZJ6 419 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 TASP1Q9H6P5 420 aa12.61□□□□□ -0.39
SMCR8-201ENST00000406438 C20orf96Q9NUD7 363 aaPredicted RBP12.61□□□□□ -0.39
SMCR8-201ENST00000406438 RNF181Q9P0P0 153 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms