RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 DDX19AQ9NUU7 478 aaKnown RBP23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 KIAA1024Q9UPX6 916 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 ZNF263O14978 683 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 ABLIM3O94929 683 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 PSMC3P17980 439 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 CCR3P51677 355 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 ZNF568Q3ZCX4 644 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 CD300LGQ6UXG3 332 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 DTHD1Q6ZMT9 781 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 YAF2Q8IY57 180 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 CELF5Q8N6W0 485 aaKnown RBP23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 NELL1Q92832 810 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 MMTAG2Q9BU76 263 aaKnown RBP23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 RAB34Q9BZG1 259 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 SLITRK6Q9H5Y7 841 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 TNFSF13BQ9Y275 285 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 INSL5Q9Y5Q6 135 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 PIAS3Q9Y6X2 628 aa23.05■■□□□ 1.28
RHBDD3-202ENST00000406335 SYN3O14994 580 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 KRT37O76014 449 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 MARCKSP29966 332 aaPredicted RBP23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 GRM5P41594 1212 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 FZD5Q13467 585 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 PRSS36Q5K4E3 855 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 TCEAL8Q8IYN2 117 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 CSGALNACT1Q8TDX6 532 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 SMARCD2Q92925 531 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 ASB16Q96NS5 453 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 ACAP3Q96P50 834 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 BHMT2Q9H2M3 363 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 CHRDQ9H2X0 955 aa23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 ZNF334Q9HCZ1 680 aaPredicted RBP23.04■■□□□ 1.28
RHBDD3-202ENST00000406335 MICAL2O94851 1124 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 SEC24AO95486 1093 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 HARSP12081 509 aaKnown RBP23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 MCM4P33991 863 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 CXCL12P48061 93 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 PEX3P56589 373 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 SOX4Q06945 474 aaPredicted RBP23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 TWF1Q12792 350 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 TPGS2Q68CL5 300 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 LAIR1Q6GTX8 287 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 HS6ST3Q8IZP7 471 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 CEP120Q8N960 986 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 CHAMP1Q96JM3 812 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 IER2Q9BTL4 223 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 ASAH2Q9NR71 780 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 FBXL5Q9UKA1 691 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 CITO14578 2027 aa23.03■■□□□ 1.28
RHBDD3-202ENST00000406335 VPS37CA5D8V6 355 aaPredicted RBP23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 E9PMD0 336 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 CPB1P15086 417 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 KCNA4P22459 653 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 FCARP24071 287 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 CCNE1P24864 410 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 VIPR2P41587 438 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 SIM2Q14190 667 aaPredicted RBP23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 KRT79Q5XKE5 535 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 ZNF280DQ6N043 979 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 POTEHQ6S545 545 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 KCNK18Q7Z418 384 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 APPL2Q8NEU8 664 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 DEPDC1BQ8WUY9 529 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 MRPL4Q9BYD3 311 aaKnown RBP23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 CDT1Q9H211 546 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 PARD6AQ9NPB6 346 aa23.02■■□□□ 1.28
RHBDD3-202ENST00000406335 ZNF292O60281 2723 aa23.02■■□□□ 1.27
RHBDD3-202ENST00000406335 DMXL1Q9Y485 3027 aa23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 VWA3AA6NCI4 1184 aa23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 GJA1P17302 382 aa23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 RPL9P32969 192 aaKnown RBP23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 KPNA1P52294 538 aaPredicted RBP23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 VITQ6UXI7 678 aa23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 ZSCAN18Q8TBC5 510 aaPredicted RBP23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 FAM200AQ8TCP9 573 aa23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 ZSWIM3Q96MP5 696 aa23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 ACO2Q99798 780 aaKnown RBP23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 FOXD4L1Q9NU39 408 aa23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 STK24Q9Y6E0 443 aa23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.01■■□□□ 1.27
RHBDD3-202ENST00000406335 DNAH14Q0VDD8 3507 aa23■■□□□ 1.27
RHBDD3-202ENST00000406335 CACNA1IQ9P0X4 2223 aa23■■□□□ 1.27
RHBDD3-202ENST00000406335 RETP07949 1114 aa23■■□□□ 1.27
RHBDD3-202ENST00000406335 CCR2P41597 374 aa23■■□□□ 1.27
RHBDD3-202ENST00000406335 DMP1Q13316 513 aaPredicted RBP23■■□□□ 1.27
RHBDD3-202ENST00000406335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23■■□□□ 1.27
RHBDD3-202ENST00000406335 MAP4K3Q8IVH8 894 aa23■■□□□ 1.27
RHBDD3-202ENST00000406335 LEMD2Q8NC56 503 aa23■■□□□ 1.27
RHBDD3-202ENST00000406335 TARS2Q9BW92 718 aaKnown RBP23■■□□□ 1.27
RHBDD3-202ENST00000406335 KMT5AQ9NQR1 393 aa23■■□□□ 1.27
RHBDD3-202ENST00000406335 MIA3Q5JRA6 1907 aa23■■□□□ 1.27
RHBDD3-202ENST00000406335 TGM1P22735 817 aa22.99■■□□□ 1.27
RHBDD3-202ENST00000406335 LRRC32Q14392 662 aa22.99■■□□□ 1.27
RHBDD3-202ENST00000406335 TEAD2Q15562 447 aa22.99■■□□□ 1.27
RHBDD3-202ENST00000406335 ZRSR1Q15695 479 aaKnown RBP22.99■■□□□ 1.27
RHBDD3-202ENST00000406335 ALKAL1Q6UXT8 129 aa22.99■■□□□ 1.27
RHBDD3-202ENST00000406335 BRAPQ7Z569 592 aa22.99■■□□□ 1.27
RHBDD3-202ENST00000406335 MFSD6LQ8IWD5 586 aa22.99■■□□□ 1.27
RHBDD3-202ENST00000406335 NETO1Q8TDF5 533 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms