RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MGRN1O60291 552 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 ATG7O95352 703 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 TTC4O95801 387 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 SF3A3Q12874 501 aaKnown RBP eCLIP10.49□□□□□ -0.73
MSH2-202ENST00000406134 ATP13A4Q4VNC1 1196 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.49□□□□□ -0.73
MSH2-202ENST00000406134 OTUD6AQ7L8S5 288 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 SNF8Q96H20 258 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 RUNDC3BQ96NL0 473 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 PCYT2Q99447 389 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 ROPN1BQ9BZX4 212 aaPredicted RBP10.49□□□□□ -0.73
MSH2-202ENST00000406134 POLR3FQ9H1D9 316 aaPredicted RBP10.49□□□□□ -0.73
MSH2-202ENST00000406134 ROPN1Q9HAT0 212 aaPredicted RBP10.49□□□□□ -0.73
MSH2-202ENST00000406134 CYP39A1Q9NYL5 469 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 LGALS13Q9UHV8 139 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 EXOC7Q9UPT5 735 aa10.49□□□□□ -0.73
MSH2-202ENST00000406134 SNX3O60493 162 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 GLRA2P23416 452 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 HMGB2P26583 209 aaKnown RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 ACOT2P49753 483 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 ACTR2P61160 394 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 LRRC14Q15048 493 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 PPP1R15BQ5SWA1 713 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 HIBCHQ6NVY1 386 aaPredicted RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 ZNF112Q9UJU3 913 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 GRID1Q9ULK0 1009 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 PCDHB2Q9Y5E7 798 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 SPATA31C2B4DYI2 1134 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 TULP1O00294 542 aaPredicted RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 HNRNPDLO14979 420 aaKnown RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 KRT5P13647 590 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 ITIH2P19823 946 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 ARL2P36404 184 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 GSCP56915 257 aaPredicted RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 RPL7AP62424 266 aaKnown RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 KYNUQ16719 465 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 NBPF12Q5TAG4 269 aaPredicted RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 PHF13Q86YI8 300 aaPredicted RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 PASD1Q8IV76 773 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 KATNAL2Q8IYT4 538 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 SERPINB12Q96P63 405 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 WDR83Q9BRX9 315 aaKnown RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 DHX33Q9H6R0 707 aaKnown RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 TPX2Q9ULW0 747 aaKnown RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 MAFBQ9Y5Q3 323 aaPredicted RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 DNAH12Q6ZR08 3092 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 IGKV6D-21A0A0A0MT36 114 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 LOC102724159A0A0B4J2E5 919 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 C3orf70A6NLC5 250 aaPredicted RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 ABLIM1O14639 778 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 DGAT1O75907 488 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 PWP2Q15269 919 aaKnown RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 ENOSF1Q7L5Y1 443 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 ZNF677Q86XU0 584 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 TMEM130Q8N3G9 435 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 WDTC1Q8N5D0 677 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 VPS33BQ9H267 617 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 MTRF1LQ9UGC7 380 aaKnown RBP10.48□□□□□ -0.73
MSH2-202ENST00000406134 EVPLQ92817 2033 aa10.48□□□□□ -0.73
MSH2-202ENST00000406134 TMEM120BA0PK00 339 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 PEX10O60683 326 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 CCND2P30279 289 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 CUL2Q13617 745 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 WLSQ5T9L3 541 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 CCDC121Q6ZUS5 278 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 ABRAQ8N0Z2 381 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 HEMGNQ9BXL5 484 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 FHDC1Q9C0D6 1143 aaPredicted RBP10.47□□□□□ -0.73
MSH2-202ENST00000406134 JPH1Q9HDC5 661 aaPredicted RBP10.47□□□□□ -0.73
MSH2-202ENST00000406134 INTS9Q9NV88 658 aaKnown RBP10.47□□□□□ -0.73
MSH2-202ENST00000406134 SEPT9Q9UHD8 586 aaPredicted RBP10.47□□□□□ -0.73
MSH2-202ENST00000406134 MTUS1Q9ULD2 1270 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 DICER1Q9UPY3 1922 aaKnown RBP10.47□□□□□ -0.73
MSH2-202ENST00000406134 PSTPIP1O43586 416 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 SLC1A1P43005 524 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 IFNAR2P48551 515 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 BACE1P56817 501 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 ELF3P78545 371 aaPredicted RBP10.47□□□□□ -0.73
MSH2-202ENST00000406134 FASTKD3Q14CZ7 662 aaKnown RBP10.47□□□□□ -0.73
MSH2-202ENST00000406134 WDR72Q3MJ13 1102 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 MIS18BP1Q6P0N0 1132 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 XRRA1Q6P2D8 792 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 CCDC25Q86WR0 208 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 MAML1Q92585 1016 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 TMEM143Q96AN5 459 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 KLHL11Q9NVR0 708 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 TRIP11Q15643 1979 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 A0A0B4J269 797 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 MYBL1P10243 752 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 FGFR1P11362 822 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 FOXN2P32314 431 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 EN1Q05925 392 aaPredicted RBP10.47□□□□□ -0.73
MSH2-202ENST00000406134 EMC2Q15006 297 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 SEZ6Q53EL9 994 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 CPLX4Q7Z7G2 160 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 CCDC197Q8NCU1 140 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 ELAC2Q9BQ52 826 aaKnown RBP10.47□□□□□ -0.73
MSH2-202ENST00000406134 C11orf70Q9BRQ4 267 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 PORCNQ9H237 461 aa10.47□□□□□ -0.73
MSH2-202ENST00000406134 ATP6V0A4Q9HBG4 840 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms