RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 CUL2Q13617 745 aa20.89■□□□□ 0.93
AC008060.1-201ENST00000401499 NECAB2Q7Z6G3 386 aa20.89■□□□□ 0.93
AC008060.1-201ENST00000401499 ZNF598Q86UK7 904 aaKnown RBP20.89■□□□□ 0.93
AC008060.1-201ENST00000401499 ECHDC2Q86YB7 292 aa20.89■□□□□ 0.93
AC008060.1-201ENST00000401499 HACE1Q8IYU2 909 aa20.89■□□□□ 0.93
AC008060.1-201ENST00000401499 DBF4BQ8NFT6 615 aa20.89■□□□□ 0.93
AC008060.1-201ENST00000401499 UBQLN1Q9UMX0 589 aaKnown RBP20.89■□□□□ 0.93
AC008060.1-201ENST00000401499 TDRD15B5MCY1 1934 aaKnown RBP20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 USP27XA6NNY8 438 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 C9IYK1 514 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 PPEF2O14830 753 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 FERP16591 822 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 CAPN2P17655 700 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 SOX4Q06945 474 aaPredicted RBP20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 KLHL30Q0D2K2 578 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 MAPK8IP2Q13387 824 aaPredicted RBP20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 ASTE1Q2TB18 679 aaPredicted RBP20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 TDRD12Q587J7 1177 aaKnown RBP20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 ENOSF1Q7L5Y1 443 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 FAM71AQ8IYT1 594 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 BEST2Q8NFU1 509 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 PPP1R10Q96QC0 940 aaKnown RBP20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 TSPAN18Q96SJ8 248 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 GAD1Q99259 594 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 HAUS4Q9H6D7 363 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 AGAP1Q9UPQ3 857 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 GIT1Q9Y2X7 761 aa20.88■□□□□ 0.93
AC008060.1-201ENST00000401499 SSU72P8A0A1W2PR75 194 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 CLSTN1O94985 981 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 NDUFA10O95299 355 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 CLTBP09497 229 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 ACO1P21399 889 aaKnown RBP20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 IBSPP21815 317 aaPredicted RBP20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 UBR7Q8N806 425 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 RNF169Q8NCN4 708 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 OLIG1Q8TAK6 271 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 TAF4BQ92750 862 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 FAM81BQ96LP2 452 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 FTHL17Q9BXU8 183 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 NIF3L1Q9GZT8 377 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 TSPYL2Q9H2G4 693 aaPredicted RBP20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 VRTNQ9H8Y1 702 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 MIOSQ9NXC5 875 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 POLIQ9UNA4 740 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 EPN1Q9Y6I3 576 aaPredicted RBP20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 ALPK3Q96L96 1907 aa20.87■□□□□ 0.93
AC008060.1-201ENST00000401499 ARL5CA6NH57 179 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 CXCL10P02778 98 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 SKIP12755 728 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 TBXAS1P24557 533 aaPredicted RBP20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 ATICP31939 592 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 ASPAP45381 313 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 RBP5P82980 135 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 PTK2Q05397 1052 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 NAB2Q15742 525 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 SLC24A5Q71RS6 500 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 ZNF571Q7Z3V5 609 aaPredicted RBP20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 CCDC170Q8IYT3 715 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 ACRBPQ8NEB7 543 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 RSAD1Q9HA92 442 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 GOLGA2P5Q9HBQ8 144 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 SPTLC3Q9NUV7 552 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 TMEM39AQ9NV64 488 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 REXO2Q9Y3B8 237 aaKnown RBP20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 ADGRG1Q9Y653 693 aa20.86■□□□□ 0.93
AC008060.1-201ENST00000401499 ANO9A1A5B4 782 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 ZNF263O14978 683 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 STAU1O95793 577 aaKnown RBP20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 EN2P19622 333 aaPredicted RBP20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 CLCN1P35523 988 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 KIF11P52732 1056 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 FAM189BP81408 668 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 C9orf57Q5W0N0 161 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 UBE2Q1Q7Z7E8 422 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 CCAR2Q8N163 923 aaKnown RBP20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 PGBD4Q96DM1 585 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 HPDLQ96IR7 371 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 CCDC42Q96M95 316 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 KCND1Q9NSA2 647 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 MICAL3Q7RTP6 2002 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 CYP3A5P20815 502 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 CYLC1P35663 651 aaPredicted RBP20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 USP8P40818 1118 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 SCNN1GP51170 649 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 ZNF667Q5HYK9 610 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 SCARA5Q6ZMJ2 495 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 FMNL3Q8IVF7 1028 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 SEPT8Q92599 483 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 JAKMIP2Q96AA8 810 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 VWCEQ96DN2 955 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 RPS6KC1Q96S38 1066 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 SYT11Q9BT88 431 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 ACP6Q9NPH0 428 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 TRMT1Q9NXH9 659 aaKnown RBP20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 NXF1Q9UBU9 619 aaKnown RBP20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 PPP2R2CQ9Y2T4 447 aa20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 BZW2Q9Y6E2 419 aaKnown RBP20.85■□□□□ 0.93
AC008060.1-201ENST00000401499 EIF3CLB5ME19 914 aaKnown RBP20.84■□□□□ 0.93
AC008060.1-201ENST00000401499 PIRO00625 290 aa20.84■□□□□ 0.93
AC008060.1-201ENST00000401499 CYP26A1O43174 497 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms