RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 CD302Q8IX05 232 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 UBALD2Q8IYN6 164 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 SLC7A14Q8TBB6 771 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 FAM212AQ96EL1 285 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 MFSD14AQ96MC6 490 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 TSPAN18Q96SJ8 248 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 KCNK12Q9HB15 430 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 OLFML3Q9NRN5 406 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 PANK4Q9NVE7 773 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 KBTBD4Q9NVX7 518 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 EPS15L1Q9UBC2 864 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 AGO2Q9UKV8 859 aaKnown RBP17.24■□□□□ 0.35
ATG4B-203ENST00000400772 PCDHA7Q9UN72 937 aa17.24■□□□□ 0.35
ATG4B-203ENST00000400772 WDR27A2RRH5 827 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 M0QZQ0 153 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 PPEF2O14830 753 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 CCL16O15467 120 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 NFICP08651 508 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 HOXA9P31269 272 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 NTHL1P78549 312 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 GRASPQ7Z6J2 395 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-203ENST00000400772 ZSWIM2Q8NEG5 633 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 ZNF461Q8TAF7 563 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 ACCSQ96QU6 501 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 FBXL5Q9UKA1 691 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 PCDHB8Q9UN66 801 aa17.23■□□□□ 0.35
ATG4B-203ENST00000400772 DOCK8Q8NF50 2099 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 H7C4K7 107 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 GCNT3O95395 438 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 PDGFBP01127 241 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-203ENST00000400772 POU2F2P09086 479 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 GBP2P32456 591 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-203ENST00000400772 DNM1Q05193 864 aaKnown RBP17.22■□□□□ 0.35
ATG4B-203ENST00000400772 RSAD2Q8WXG1 361 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 POMGNT1Q8WZA1 660 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 DHX58Q96C10 678 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 DERAQ9Y315 318 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 ZDHHC9Q9Y397 364 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 PCDHB13Q9Y5F0 798 aa17.22■□□□□ 0.35
ATG4B-203ENST00000400772 TIMM13Q9Y5L4 95 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-203ENST00000400772 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-203ENST00000400772 PIRO00625 290 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 XPOTO43592 962 aaKnown RBP17.21■□□□□ 0.35
ATG4B-203ENST00000400772 PRPF6O94906 941 aaKnown RBP17.21■□□□□ 0.35
ATG4B-203ENST00000400772 SEC24AO95486 1093 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 ARPP19P56211 112 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 WNT7BP56706 349 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 POU5F1Q01860 360 aaKnown RBP17.21■□□□□ 0.35
ATG4B-203ENST00000400772 TMEM132DQ14C87 1099 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 POSTNQ15063 836 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 CTXN3Q4LDR2 81 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 ATL3Q6DD88 541 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 RTL10Q7L3V2 364 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 GET4Q7L5D6 327 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-203ENST00000400772 FBXL6Q8N531 539 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 IQUBQ8NA54 791 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 GLIS3Q8NEA6 775 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 APPL2Q8NEU8 664 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 BEST2Q8NFU1 509 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 KCNG4Q8TDN1 519 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 HPS3Q969F9 1004 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 TRIM9Q9C026 710 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 CUEDC2Q9H467 287 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 ASB7Q9H672 318 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 HCFC1R1Q9NWW0 138 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.21■□□□□ 0.358e-14■□□□□ 9.8
ATG4B-203ENST00000400772 DNMT3BQ9UBC3 853 aaKnown RBP17.21■□□□□ 0.35
ATG4B-203ENST00000400772 RCOR1Q9UKL0 485 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 EXOC7Q9UPT5 735 aa17.21■□□□□ 0.35
ATG4B-203ENST00000400772 ZNF318Q5VUA4 2279 aa17.21■□□□□ 0.34
ATG4B-203ENST00000400772 ANK1P16157 1881 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 NOTCH4Q99466 2003 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 ANO9A1A5B4 782 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 ARHGEF37A1IGU5 675 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 SPTLC1O15269 473 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 OAZ2O95190 189 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 LAMP2P13473 410 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 ATF2P15336 505 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 FSHRP23945 695 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 PLA2G5P39877 138 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 LILRA4P59901 499 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 TDGQ13569 410 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 C9orf57Q5W0N0 161 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 ZNF280DQ6N043 979 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 CNNM4Q6P4Q7 775 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 CCDC65Q8IXS2 484 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 EFCAB13Q8IY85 973 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 IGSF9Q9P2J2 1179 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 POLIQ9UNA4 740 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 C2CD2Q9Y426 696 aa17.2■□□□□ 0.34
ATG4B-203ENST00000400772 POLR2DO15514 142 aaKnown RBP17.19■□□□□ 0.34
ATG4B-203ENST00000400772 XYLBO75191 536 aa17.19■□□□□ 0.34
ATG4B-203ENST00000400772 HOXD13P35453 343 aa17.19■□□□□ 0.34
ATG4B-203ENST00000400772 ME1P48163 572 aa17.19■□□□□ 0.34
ATG4B-203ENST00000400772 ALCAMQ13740 583 aa17.19■□□□□ 0.34
ATG4B-203ENST00000400772 IER5LQ5T953 404 aa17.19■□□□□ 0.34
ATG4B-203ENST00000400772 RESP18Q5W5W9 173 aa17.19■□□□□ 0.34
ATG4B-203ENST00000400772 DSTYKQ6XUX3 929 aa17.19■□□□□ 0.34
ATG4B-203ENST00000400772 TCEAL8Q8IYN2 117 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms