RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CFAP69A5D8W1 941 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 ZNF157P51786 506 aaPredicted RBP19.14■□□□□ 0.65
COL18A1-204ENST00000400337 LONRF1Q17RB8 773 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 GPRC5AQ8NFJ5 357 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 ZDHHC15Q96MV8 337 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 NIF3L1Q9GZT8 377 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 LMNAP02545 664 aaKnown RBP19.14■□□□□ 0.65
COL18A1-204ENST00000400337 CYP2C9P11712 490 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 TCF7P36402 384 aaPredicted RBP19.14■□□□□ 0.65
COL18A1-204ENST00000400337 EGFL8Q99944 293 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 CCL15-CCL14A0A0B4J2E2 113 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 CCL15Q16663 113 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 IMPG1Q17R60 797 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 JAMLQ86YT9 394 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 SYN2Q92777 582 aaPredicted RBP19.14■□□□□ 0.65
COL18A1-204ENST00000400337 DACT3Q96B18 629 aaPredicted RBP19.14■□□□□ 0.65
COL18A1-204ENST00000400337 NEU2Q9Y3R4 380 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 AGTP01019 485 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 HADHAP40939 763 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 CDR2Q01850 454 aa19.14■□□□□ 0.65
COL18A1-204ENST00000400337 PRMT1Q99873 361 aaKnown RBP19.14■□□□□ 0.65
COL18A1-204ENST00000400337 FOXP2O15409 715 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 SNX19Q92543 992 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 MMTAG2Q9BU76 263 aaKnown RBP19.13■□□□□ 0.65
COL18A1-204ENST00000400337 GPRC5CQ9NQ84 441 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 SENP1Q9P0U3 644 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 HPSEQ9Y251 543 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 PPP1R37O75864 691 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 RPAINQ86UA6 219 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 NOA1Q8NC60 698 aaKnown RBP19.13■□□□□ 0.65
COL18A1-204ENST00000400337 RDM1Q8NG50 284 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 OR2W6PQ8NHA6 318 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 UBA3Q8TBC4 463 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 TCP11X1B4DZS4 312 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 CD4P01730 458 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 DCAF4L1Q3SXM0 396 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 COL23A1Q86Y22 540 aaPredicted RBP19.13■□□□□ 0.65
COL18A1-204ENST00000400337 ARHGEF26Q96DR7 871 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 CLMNQ96JQ2 1002 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 CELF4Q9BZC1 486 aaKnown RBP19.13■□□□□ 0.65
COL18A1-204ENST00000400337 ECT2Q9H8V3 914 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 VIPAS39Q9H9C1 493 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 ADGRB1O14514 1584 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 RPS6KA5O75582 802 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 KCNJ1P48048 391 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 ZBTB41Q5SVQ8 909 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 ANKRD13AQ8IZ07 590 aa19.13■□□□□ 0.65
COL18A1-204ENST00000400337 RIN2Q8WYP3 895 aaPredicted RBP19.13■□□□□ 0.65
COL18A1-204ENST00000400337 CCDC124Q96CT7 223 aaKnown RBP19.13■□□□□ 0.65
COL18A1-204ENST00000400337 TADA2AO75478 443 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 CYP4F11Q9HBI6 524 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 XPO7Q9UIA9 1087 aaKnown RBP19.12■□□□□ 0.65
COL18A1-204ENST00000400337 DBR1Q9UK59 544 aaKnown RBP19.12■□□□□ 0.65
COL18A1-204ENST00000400337 EZH2Q15910 746 aaKnown RBP19.12■□□□□ 0.65
COL18A1-204ENST00000400337 SMTNL2Q2TAL5 461 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 DDX42Q86XP3 938 aaKnown RBP eCLIP19.12■□□□□ 0.65
COL18A1-204ENST00000400337 USP38Q8NB14 1042 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 CXorf38Q8TB03 319 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 USP33Q8TEY7 942 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 N4BP2L2Q92802 583 aaPredicted RBP19.12■□□□□ 0.65
COL18A1-204ENST00000400337 ZC3H7BQ9UGR2 993 aaKnown RBP19.12■□□□□ 0.65
COL18A1-204ENST00000400337 KCNH4Q9UQ05 1017 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 SALL3Q9BXA9 1300 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 C3orf70A6NLC5 250 aaPredicted RBP19.12■□□□□ 0.65
COL18A1-204ENST00000400337 CDH16O75309 829 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 ARP10275 920 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 BRD2P25440 801 aaKnown RBP19.12■□□□□ 0.65
COL18A1-204ENST00000400337 MDH1P40925 334 aaKnown RBP19.12■□□□□ 0.65
COL18A1-204ENST00000400337 FAM161BQ96MY7 647 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 NDFIP2Q9NV92 336 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 KIDINS220Q9ULH0 1771 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 CARSP49589 748 aaKnown RBP19.12■□□□□ 0.65
COL18A1-204ENST00000400337 NBPF9Q3BBW0 867 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 SEZ6Q53EL9 994 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 SLC13A4Q9UKG4 626 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 PLAGL2Q9UPG8 496 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 KIAA1210Q9ULL0 1709 aa19.12■□□□□ 0.65
COL18A1-204ENST00000400337 CCDC78A2IDD5 438 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 GRAMD1AQ96CP6 724 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 GRIN3BO60391 1043 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 PIDD1Q9HB75 910 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 AFF4Q9UHB7 1163 aaKnown RBP19.11■□□□□ 0.65
COL18A1-204ENST00000400337 IQGAP1P46940 1657 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 ANP32DO95626 131 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 ADA2Q9NZK5 511 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 ITGA4P13612 1032 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 SREBF1P36956 1147 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 ERVK-24P63145 666 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 NTRK3Q16288 839 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 ZNF677Q86XU0 584 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 HPDLQ96IR7 371 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 FAM205AQ6ZU69 1335 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 ESRRBO95718 433 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 HMBSP08397 361 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 CHN1P15882 459 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 MTM1Q13496 603 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 SPATA18Q8TC71 538 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 GTF3C2Q8WUA4 911 aaPredicted RBP19.11■□□□□ 0.65
COL18A1-204ENST00000400337 THAP2Q9H0W7 228 aa19.11■□□□□ 0.65
COL18A1-204ENST00000400337 C17orf75Q9HAS0 396 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms