RNA–Protein interactions for RNA: ENST00000400186.7

CSMD1-202, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-202ENST00000400186 TJP2Q9UDY2 1190 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 DBR1Q9UK59 544 aaKnown RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 CPSF1Q10570 1443 aaKnown RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 ZNF197O14709 1029 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 KPNB1Q14974 876 aaKnown RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 SNRNP48Q6IEG0 339 aaKnown RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 GPD1LQ8N335 351 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 TUBGCP3Q96CW5 907 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 ELMO2Q96JJ3 720 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 XPO6Q96QU8 1125 aaKnown RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 STK33Q9BYT3 514 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 ZHX2Q9Y6X8 837 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 C3orf70A6NLC5 250 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 KHDRBS2Q5VWX1 349 aaKnown RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 CYB5R4Q7L1T6 521 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 RASGRP2Q7LDG7 609 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 FOPNLQ96NB1 174 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 TMEM47Q9BQJ4 181 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 TMEM2Q9UHN6 1383 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 TCN1P20061 433 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 PDAP1Q13442 181 aaKnown RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 ZFP42Q96MM3 310 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 MCEEQ96PE7 176 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 AGPAT1Q99943 283 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 PRG3Q9Y2Y8 225 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 ADGRA2Q96PE1 1338 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 LRRC74AQ0VAA2 488 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 CSTF3Q12996 717 aaKnown RBP10.07□□□□□ -0.8
CSMD1-202ENST00000400186 FAM180AQ6UWF9 173 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 HDDC2Q7Z4H3 204 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 PLEKHA5Q9HAU0 1116 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 NEU2Q9Y3R4 380 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 A0A1B0GTH6 734 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 DGKIO75912 1065 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 SERPINB9P50453 376 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 KCNB1Q14721 858 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 WLSQ5T9L3 541 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 LVRNQ6Q4G3 990 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 CYFIP1Q7L576 1253 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 KDELC2Q7Z4H8 507 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 SESN1Q9Y6P5 492 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 V9GYQ6 96 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 HECW2Q9P2P5 1572 aa10.07□□□□□ -0.8
CSMD1-202ENST00000400186 GOLGA8TH3BQL2 631 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 MLH1P40692 756 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 ATXN3P54252 364 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 LAMB3Q13751 1172 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 VPS50Q96JG6 964 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 RBM12Q9NTZ6 932 aaKnown RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 ATP9BO43861 1147 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 FAM107AO95990 144 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 KCNJ6P48051 423 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 PTPN12Q05209 780 aaKnown RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 TRIP4Q15650 581 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 SYTL3Q4VX76 610 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 EIF2AK1Q9BQI3 630 aaKnown RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 HEG1Q9ULI3 1381 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 TCF3P15923 654 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 SH3TC2Q8TF17 1288 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 NSL1Q96IY1 281 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 OSBPL8Q9BZF1 889 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 EXOSC4Q9NPD3 245 aaKnown RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 GABBR1Q9UBS5 961 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 AGO2Q9UKV8 859 aaKnown RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 NCAPD2Q15021 1401 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 KYAT1Q16773 422 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 TTC39BQ5VTQ0 682 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 SNX31Q8N9S9 440 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 KIF12Q96FN5 646 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 WNK4Q96J92 1243 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 ZCWPW1Q9H0M4 648 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 PP2D1A8MPX8 630 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 TMED8Q6PL24 325 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 MICU2Q8IYU8 434 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 TBC1D19Q8N5T2 526 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 APEX2Q9UBZ4 518 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 IGSF1Q8N6C5 1336 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 ATP2C1P98194 919 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 SF3B3Q15393 1217 aaKnown RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 KIZQ2M2Z5 673 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 ADAM33Q9BZ11 813 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 IMPAD1Q9NX62 359 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 SCN3BQ9NY72 215 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 MAP3K4Q9Y6R4 1608 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 CYP26A1O43174 497 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 RCN1Q15293 331 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 SLC18A3Q16572 532 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 MRPS26Q9BYN8 205 aaKnown RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 NLRP1Q9C000 1473 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 PRAMEF22A3QJZ6 481 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 SPAG6O75602 509 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 ACADSP16219 412 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 COPAP53621 1224 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 GPR141Q7Z602 305 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 HIC2Q96JB3 615 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 FOXP3Q9BZS1 431 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 JPH1Q9HDC5 661 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-202ENST00000400186 UTYO14607 1347 aa10.06□□□□□ -0.8
CSMD1-202ENST00000400186 FKBP9O95302 570 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms