RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 PABPC4Q13310 644 aaKnown RBP eCLIP8.78□□□□□ -18e-7■■■■□ 23.2
CHD8-201ENST00000399982 DPY19L2Q6NUT2 758 aa8.78□□□□□ -1
CHD8-201ENST00000399982 SPATA31E1Q6ZUB1 1445 aa8.77□□□□□ -1
CHD8-201ENST00000399982 MED26O95402 600 aa8.77□□□□□ -1
CHD8-201ENST00000399982 LDHAP00338 332 aaKnown RBP8.77□□□□□ -1
CHD8-201ENST00000399982 ITGA3P26006 1051 aa8.77□□□□□ -1
CHD8-201ENST00000399982 AP1S2P56377 157 aa8.77□□□□□ -1
CHD8-201ENST00000399982 CSNK2BP67870 215 aa8.77□□□□□ -1
CHD8-201ENST00000399982 OLFML1Q6UWY5 402 aa8.77□□□□□ -1
CHD8-201ENST00000399982 BBS7Q8IWZ6 715 aa8.77□□□□□ -1
CHD8-201ENST00000399982 SAR1AQ9NR31 198 aa8.77□□□□□ -1
CHD8-201ENST00000399982 KRT84Q9NSB2 600 aa8.77□□□□□ -1
CHD8-201ENST00000399982 ASNSD1Q9NWL6 643 aa8.77□□□□□ -1
CHD8-201ENST00000399982 KLHL8Q9P2G9 620 aaPredicted RBP8.77□□□□□ -1
CHD8-201ENST00000399982 B2RBV5 119 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 FAM47E-STBD1D6RA91 191 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 PSMD3O43242 534 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 TBXAS1P24557 533 aaPredicted RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 NECTIN1Q15223 517 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 THEM5Q8N1Q8 247 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 CCNYL1Q8N7R7 359 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 ATXN2LQ8WWM7 1075 aaKnown RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 KRT35Q92764 455 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 ADGRL2O95490 1459 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 ZBTB22O15209 634 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 GNPATO15228 680 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 SRP72O76094 671 aaKnown RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 LCA5LO95447 670 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 SERPINH1P50454 418 aaKnown RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 RPS6P62753 249 aaKnown RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 YWHAZP63104 245 aaKnown RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 SLC39A6Q13433 755 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 GTF2H3Q13889 308 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 FAM83BQ5T0W9 1011 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 TIGD7Q6NT04 549 aaPredicted RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 CDH24Q86UP0 819 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 ATP8B4Q8TF62 1192 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 ADGRL3Q9HAR2 1447 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 POLR2EP19388 210 aaKnown RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 ITGA6P23229 1130 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 CENPCQ03188 943 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 SLC34A1Q06495 639 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 ANKS6Q68DC2 871 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 DCUN1D1Q96GG9 259 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 LRRC1Q9BTT6 524 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 VPS11Q9H270 941 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 ABCB11O95342 1321 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 TRPC5OSA6NMA1 111 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 AKAP10O43572 662 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 BCL10O95999 233 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 ATP1A1P05023 1023 aaKnown RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 FNTAP49354 379 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 CDK17Q00537 523 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 COX10Q12887 443 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 TSGA10IPQ3SY00 556 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 SYTL3Q4VX76 610 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 DENND6AQ8IWF6 608 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 USP44Q9H0E7 712 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 PLGRKTQ9HBL7 147 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 ENOPH1Q9UHY7 261 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 RAB21Q9UL25 225 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 ABCB1P08183 1280 aaPredicted RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 CD58P19256 250 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 KCNQ4P56696 695 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 SLC18A3Q16572 532 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 SNX30Q5VWJ9 437 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 FAM9CQ8IZT9 166 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 SNRNP27Q8WVK2 155 aaKnown RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 SMARCAL1Q9NZC9 954 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 BFARQ9NZS9 450 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 MAD2L2Q9UI95 211 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 KIAA1024Q9UPX6 916 aa8.77□□□□□ -1.01
CHD8-201ENST00000399982 CPSF1Q10570 1443 aaKnown RBP8.77□□□□□ -1.01
CHD8-201ENST00000399982 PHF20L1A8MW92 1017 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 SLCO1B7G3V0H7 640 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 P4HA2O15460 535 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 CD2BP2O95400 341 aaKnown RBP8.76□□□□□ -1.01
CHD8-201ENST00000399982 POLR2MP0CAP2 368 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 RFX3P48380 749 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 DMPKQ09013 629 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 TMEM35BQ8NCS4 154 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 TSPAN17Q96FV3 270 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 RNPC3Q96LT9 517 aaKnown RBP8.76□□□□□ -1.01
CHD8-201ENST00000399982 MYL10Q9BUA6 226 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 PABPC3Q9H361 631 aaKnown RBP8.76□□□□□ -1.01
CHD8-201ENST00000399982 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
CHD8-201ENST00000399982 SERPINB13Q9UIV8 391 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 USP27XA6NNY8 438 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 F8VZ95 297 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 DNALI1O14645 258 aaPredicted RBP8.76□□□□□ -1.01
CHD8-201ENST00000399982 UBTFL6P0CB48 400 aaPredicted RBP8.76□□□□□ -1.01
CHD8-201ENST00000399982 KPNA1P52294 538 aaPredicted RBP8.76□□□□□ -1.01
CHD8-201ENST00000399982 C21orf59P57076 290 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 TIMM10P62072 90 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 DLGAP5Q15398 846 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 CHSY1Q86X52 802 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 GJA10Q969M2 543 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 CDHR1Q96JP9 859 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 RBBP8Q99708 897 aa8.76□□□□□ -1.01
CHD8-201ENST00000399982 THTPAQ9BU02 230 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms