RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 HIST1H2ADP20671 130 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 NLRP10Q86W26 655 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 HIST1H2AHQ96KK5 128 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 HIST1H2AJQ99878 128 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 H2AFJQ9BTM1 129 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 C6orf62Q9GZU0 229 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 BATF3Q9NR55 127 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 SCRN1Q12765 414 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 SKIV2LQ15477 1246 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 DDX53Q86TM3 631 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 LRRC71Q8N4P6 559 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 GCOM2Q9BZD3 368 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 CYLDQ9NQC7 956 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 CYP26B1Q9NR63 512 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 IL6P05231 212 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 IL31Q6EBC2 164 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 OSBPL6Q9BZF3 934 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 ERAP1Q9NZ08 941 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 PBRM1Q86U86 1689 aa13.1□□□□□ -0.31
CACNA1C-209ENST00000399603 ZNF839A8K0R7 811 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 CENPXA8MT69 81 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 ZBTB39O15060 712 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 RHAGQ02094 409 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 KLHL12Q53G59 568 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 PPP1R2P3Q6NXS1 205 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 OSBP2Q969R2 916 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 DHTKD1Q96HY7 919 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 ZMYM6O95789 1325 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 SSH2Q76I76 1423 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 XDHP47989 1333 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 LOC100653049A0A140TA62 436 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 SMIM31A0A1B0GVY4 71 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 ZNF862O60290 1169 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 KRT34O76011 436 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 AKT1P31749 480 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 ARHGEF6Q15052 776 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 CAPSLQ8WWF8 208 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 MSTO1Q9BUK6 570 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 FKBP3Q00688 224 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 RALGDSQ12967 914 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 RHPN2Q8IUC4 686 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 MB21D1Q8N884 522 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 AGAP3Q96P47 875 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 SLC9A7Q96T83 725 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 FAM49AQ9H0Q0 323 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 HERC5Q9UII4 1024 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 CYP2D7A0A087X1C5 515 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 SLFN13Q68D06 897 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 RBM41Q96IZ5 413 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 LATS2Q9NRM7 1088 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 CDC25BP30305 580 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 SESN2P58004 480 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 KCTD2Q14681 263 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 VPS37AQ8NEZ2 397 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 RDM1Q8NG50 284 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 TSSK1BQ9BXA7 367 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 ASNSD1Q9NWL6 643 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 STK39Q9UEW8 545 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 MAN1B1Q9UKM7 699 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 ERCC6L2Q5T890 1561 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 HEG1Q9ULI3 1381 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 GDF11O95390 407 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 GAP43P17677 238 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 PSMC3P17980 439 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 PTPN1P18031 435 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 ROR1Q01973 937 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 THEM5Q8N1Q8 247 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 SCFD1Q8WVM8 642 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 RSPH1Q8WYR4 309 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 EPC1Q9H2F5 836 aa13.09□□□□□ -0.31
CACNA1C-209ENST00000399603 C1orf232A0A0U1RR37 186 aa13.08□□□□□ -0.31
CACNA1C-209ENST00000399603 NCK2O43639 380 aa13.08□□□□□ -0.31
CACNA1C-209ENST00000399603 POU5F1Q01860 360 aaKnown RBP13.08□□□□□ -0.31
CACNA1C-209ENST00000399603 NKX1-1Q15270 411 aaPredicted RBP13.08□□□□□ -0.31
CACNA1C-209ENST00000399603 EPHX4Q8IUS5 362 aa13.08□□□□□ -0.31
CACNA1C-209ENST00000399603 RBBP8NLQ8NC74 664 aaPredicted RBP13.08□□□□□ -0.31
CACNA1C-209ENST00000399603 SHCBP1LQ9BZQ2 653 aa13.08□□□□□ -0.31
CACNA1C-209ENST00000399603 PIDD1Q9HB75 910 aa13.08□□□□□ -0.31
CACNA1C-209ENST00000399603 ADAM30Q9UKF2 790 aa13.08□□□□□ -0.31
CACNA1C-209ENST00000399603 TRIM66O15016 1216 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 ZCWPW2Q504Y3 356 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 CYP4A22Q5TCH4 519 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 THNSL1Q8IYQ7 743 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 PCYOX1LQ8NBM8 494 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 PGBD4Q96DM1 585 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 DYNLL2Q96FJ2 89 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 TMEM206Q9H813 350 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 CD274Q9NZQ7 290 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 BFARQ9NZS9 450 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 ALOX12P18054 663 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 TNFAIP2Q03169 654 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 ERAP2Q6P179 960 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 ARHGAP27Q6ZUM4 889 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 FLAD1Q8NFF5 587 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 ENKURQ8TC29 256 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 SYNGAP1Q96PV0 1343 aa13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 LRRIQ3A6PVS8 624 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-209ENST00000399603 POTEIP0CG38 1075 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms