RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 A0A087WZ62 844 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 TRIM66O15016 1216 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 INPP5BP32019 993 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 TWF1Q12792 350 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 RIOX2Q8IUF8 465 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 C7orf61Q8IZ16 206 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 SENP7Q9BQF6 1050 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 RTFDC1Q9BY42 306 aaPredicted RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 UTP6Q9NYH9 597 aaKnown RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 FIS1Q9Y3D6 152 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 PCDHB9Q9Y5E1 797 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 C3orf70A6NLC5 250 aaPredicted RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 VWA5AO00534 786 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 FBXO21O94952 628 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 VTNP04004 478 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 CDC27P30260 824 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 DCAF6Q58WW2 860 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 UBE2Q2Q8WVN8 375 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 OTUB1Q96FW1 271 aaPredicted RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 NEUROG2Q9H2A3 272 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 PCDHB5Q9Y5E4 795 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 H3BRB1 525 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 POLR1AO95602 1720 aaPredicted RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 ASS1P00966 412 aaKnown RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 SERPIND1P05546 499 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 SGCGQ13326 291 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 KIF19Q2TAC6 998 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 ANKS6Q68DC2 871 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 RHOT1Q8IXI2 618 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 CEMIPQ8WUJ3 1361 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 AHCYL2Q96HN2 611 aaKnown RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 WNT8AQ9H1J5 351 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 TUT1Q9H6E5 874 aaKnown RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 EML4Q9HC35 981 aaKnown RBP8.38□□□□□ -1.07
USP47-203ENST00000399455 KLK14Q9P0G3 267 aa8.38□□□□□ -1.07
USP47-203ENST00000399455 IFT172Q9UG01 1749 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 H2AFYO75367 372 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 ZNF445P59923 1031 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 FSTL1Q12841 308 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 PEX6Q13608 980 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 ERAP2Q6P179 960 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 ATL2Q8NHH9 583 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 TSPAN17Q96FV3 270 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 SPACA7Q96KW9 195 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.37□□□□□ -1.07
USP47-203ENST00000399455 TOM1L1O75674 476 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 HIRAP54198 1017 aaPredicted RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 DR1Q01658 176 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 GPR142Q7Z601 462 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 L3MBTL3Q96JM7 780 aaPredicted RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 FBXO44Q9H4M3 255 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 KLHL11Q9NVR0 708 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 BFARQ9NZS9 450 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 ARHGEF28Q8N1W1 1705 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 PODXLO00592 558 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 LUC7L3O95232 432 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 ERVK-10P10266 1014 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 KLRC1P26715 233 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 GRK4P32298 578 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 KIZQ2M2Z5 673 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 P3H1Q32P28 736 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 MOXD1Q6UVY6 613 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 DDX42Q86XP3 938 aaKnown RBP eCLIP8.37□□□□□ -1.07
USP47-203ENST00000399455 GUF1Q8N442 669 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 RNPC3Q96LT9 517 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 AIFM3Q96NN9 605 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 P2RX7Q99572 595 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 NLNQ9BYT8 704 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 GPR63Q9BZJ6 419 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 UBE2OQ9C0C9 1292 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 ECT2Q9H8V3 914 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 MAD2L2Q9UI95 211 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 PITPNM2Q9BZ72 1349 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 NCAM1P13591 858 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 CDH6P55285 790 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 OXER1Q8TDS5 423 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 SLC28A3Q9HAS3 691 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 LMBRD1Q9NUN5 540 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 DNAJC17Q9NVM6 304 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 PCSK1NQ9UHG2 260 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 PARP4Q9UKK3 1724 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 KRT37O76014 449 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 BBS9Q3SYG4 887 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 PPP4R4Q6NUP7 873 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 KIF2CQ99661 725 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 TINF2Q9BSI4 451 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 Q9H521 79 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 AGO4Q9HCK5 861 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 TMEM8AQ9HCN3 771 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 VPS9D1Q9Y2B5 631 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 MTSS1O43312 755 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 ITGB3P05106 788 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 PIGHQ14442 188 aaPredicted RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 DRAP1Q14919 205 aaPredicted RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 PKN2Q16513 984 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 DACT2Q5SW24 774 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 UGT3A1Q6NUS8 523 aa8.37□□□□□ -1.07
USP47-203ENST00000399455 ALKBH5Q6P6C2 394 aaKnown RBP8.37□□□□□ -1.07
USP47-203ENST00000399455 TNS4Q8IZW8 715 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms