RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 MXD3Q9BW11 206 aa6.69□□□□□ -1.34
TRAPPC13-202ENST00000399438 MAGEH1Q9H213 219 aa6.69□□□□□ -1.34
TRAPPC13-202ENST00000399438 HSD3B7Q9H2F3 369 aa6.69□□□□□ -1.34
TRAPPC13-202ENST00000399438 VPS37BQ9H9H4 285 aa6.69□□□□□ -1.34
TRAPPC13-202ENST00000399438 TCP11L1Q9NUJ3 509 aa6.69□□□□□ -1.34
TRAPPC13-202ENST00000399438 KLK14Q9P0G3 267 aa6.69□□□□□ -1.34
TRAPPC13-202ENST00000399438 STX8Q9UNK0 236 aa6.69□□□□□ -1.34
TRAPPC13-202ENST00000399438 RPS6KA4O75676 772 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 PLATP00750 562 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 SFPQP23246 707 aaKnown RBP eCLIP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 INPP5BP32019 993 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 CCT6AP40227 531 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 CCNA1P78396 465 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 IFI35P80217 286 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 NCBP1Q09161 790 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 SLC14A1Q13336 389 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 FILIP1LQ4L180 1135 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 RPS26P11Q5JNZ5 115 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 CCDC122Q5T0U0 273 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 IZUMO3Q5VZ72 239 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 SIAH1Q8IUQ4 282 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 SLC9A9Q8IVB4 645 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 VWA5B2Q8N398 1253 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 GSTCDQ8NEC7 633 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 PHF12Q96QT6 1004 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZNF891A8MT65 544 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 CYP2A6P11509 494 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 PCSK2P16519 638 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 ALOX12P18054 663 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 CMA1P23946 247 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 ATP5DP30049 168 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 EZH2Q15910 746 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 KRBOX4Q5JUW0 171 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 E4F1Q66K89 784 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 PGM2L1Q6PCE3 622 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 SHQ1Q6PI26 577 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 TXNDC11Q6PKC3 985 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 CYP2U1Q7Z449 544 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 CCDC91Q7Z6B0 441 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 CRACR2BQ8N4Y2 399 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 CHST13Q8NET6 341 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 RASSF8Q8NHQ8 419 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 FATE1Q969F0 183 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZNF845Q96IR2 970 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 SORBS1Q9BX66 1292 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 MAK16Q9BXY0 300 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 INTS10Q9NVR2 710 aaKnown RBP6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 DNAI1Q9UI46 699 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 VPS28Q9UK41 221 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 TFR2Q9UP52 801 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 NFE2L3Q9Y4A8 694 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 RFX7Q2KHR2 1363 aa6.68□□□□□ -1.34
TRAPPC13-202ENST00000399438 RIMBP2O15034 1052 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 KPNA5O15131 536 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 TEX33O43247 280 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 OPA1O60313 960 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 YEATS4O95619 227 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ASLP04424 464 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 BAG6P46379 1132 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 KIF11P52732 1056 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 FAPQ12884 760 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 SART3Q15020 963 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 PLCL1Q15111 1095 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 KIF4BQ2VIQ3 1234 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 RNF19BQ6ZMZ0 732 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 C2orf69Q8N8R5 385 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 FAM13CQ8NE31 585 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 OR2W6PQ8NHA6 318 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 IFT43Q96FT9 208 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 AHCYL2Q96HN2 611 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 CCDC114Q96M63 670 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 MED15Q96RN5 788 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 EPN3Q9H201 632 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 KRT82Q9NSB4 513 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 INTS13Q9NVM9 706 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 DDX18Q9NVP1 670 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 TBC1D7Q9P0N9 293 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 TRAF3IP3Q9Y228 551 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 SLC27A5Q9Y2P5 690 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 PCDHGB2Q9Y5G2 931 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ERVV-1B6SEH8 477 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 FANCGO15287 622 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 MYO1BO43795 1136 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 TUSC2O75896 110 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 CDKL5O76039 1030 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 MMP1P03956 469 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 FERP16591 822 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 NRG1Q02297 640 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 LRP8Q14114 963 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ERV3-1Q14264 604 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 AP1ARQ63HQ0 302 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 JMJD6Q6NYC1 403 aaPredicted RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZNF783Q6ZMS7 281 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ANKRD35Q8N283 1001 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 SRBD1Q8N5C6 995 aaKnown RBP6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 ZBTB44Q8NCP5 570 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 SNX29Q8TEQ0 813 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 TGFBRAP1Q8WUH2 860 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 GATAD2BQ8WXI9 593 aa6.67□□□□□ -1.34
TRAPPC13-202ENST00000399438 HTRA1Q92743 480 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms