RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 C7orf61Q8IZ16 206 aa17.45■□□□□ 0.38
TNRC18-202ENST00000399434 PANX2Q96RD6 677 aa17.45■□□□□ 0.38
TNRC18-202ENST00000399434 UBE2TQ9NPD8 197 aaPredicted RBP17.45■□□□□ 0.38
TNRC18-202ENST00000399434 DAAM1Q9Y4D1 1078 aa17.45■□□□□ 0.38
TNRC18-202ENST00000399434 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.45■□□□□ 0.382e-7■■■□□ 17
TNRC18-202ENST00000399434 ANO9A1A5B4 782 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 EOMESO95936 686 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 KRT19P08727 400 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 TPM1P09493 284 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 CYP3A5P20815 502 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 IGFBP6P24592 240 aaPredicted RBP17.44■□□□□ 0.38
TNRC18-202ENST00000399434 HNRNPH3P31942 346 aaKnown RBP17.44■□□□□ 0.38
TNRC18-202ENST00000399434 GATMP50440 423 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 GCNT1Q02742 428 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 RAPGEF1Q13905 1077 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 MEA1Q16626 185 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 C9orf57Q5W0N0 161 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.44■□□□□ 0.38
TNRC18-202ENST00000399434 FAM43BQ6ZT52 329 aaPredicted RBP17.44■□□□□ 0.38
TNRC18-202ENST00000399434 CACNA2D4Q7Z3S7 1137 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 PPM1KQ8N3J5 372 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 UBR7Q8N806 425 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 BEST2Q8NFU1 509 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 ELAC1Q9H777 363 aaKnown RBP17.44■□□□□ 0.38
TNRC18-202ENST00000399434 POLIQ9UNA4 740 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 AGAP1Q9UPQ3 857 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 PIRO00625 290 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 STAU1O95793 577 aaKnown RBP17.44■□□□□ 0.38
TNRC18-202ENST00000399434 LRPAP1P30533 357 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 ASPAP45381 313 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 TRPC3Q13507 836 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 DRAP1Q14919 205 aaPredicted RBP17.44■□□□□ 0.38
TNRC18-202ENST00000399434 ARHGAP44Q17R89 818 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 ZNF699Q32M78 642 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 OR8K1Q8NGG5 319 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 SHC3Q92529 594 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 RPS6KC1Q96S38 1066 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 STK33Q9BYT3 514 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 VRTNQ9H8Y1 702 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 UBN1Q9NPG3 1134 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 MYO6Q9UM54 1294 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 INPP5FQ9Y2H2 1132 aa17.44■□□□□ 0.38
TNRC18-202ENST00000399434 KIAA1671Q9BY89 1806 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 POMCP01189 267 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 ACRP10323 421 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 ACO1P21399 889 aaKnown RBP17.43■□□□□ 0.38
TNRC18-202ENST00000399434 RBP5P82980 135 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 GRIK3Q13003 919 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 CUL2Q13617 745 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 SGSM1Q2NKQ1 1148 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 WDR44Q5JSH3 913 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 HGSNATQ68CP4 663 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 C16orf59Q7L2K0 433 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 OLIG1Q8TAK6 271 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 NIF3L1Q9GZT8 377 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 SDCBP2Q9H190 292 aa17.43■□□□□ 0.38
TNRC18-202ENST00000399434 FOXN3O00409 490 aaPredicted RBP17.42■□□□□ 0.38
TNRC18-202ENST00000399434 SPTLC1O15269 473 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 THP07101 528 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 ATICP31939 592 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 EPHB4P54760 987 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 GLB1LQ6UWU2 654 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 TMEM199Q8N511 208 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 TAF4BQ92750 862 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 SYN2Q92777 582 aaPredicted RBP17.42■□□□□ 0.38
TNRC18-202ENST00000399434 BADQ92934 168 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 HPDLQ96IR7 371 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 SPAG5Q96R06 1193 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 CHP1Q99653 195 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 PAAF1Q9BRP4 392 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 BCO2Q9BYV7 579 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 IMPG2Q9BZV3 1241 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 IL23AQ9NPF7 189 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.42■□□□□ 0.38
TNRC18-202ENST00000399434 AIPL1Q9NZN9 384 aa17.42■□□□□ 0.38
TNRC18-202ENST00000399434 XPOTO43592 962 aaKnown RBP17.41■□□□□ 0.38
TNRC18-202ENST00000399434 PLEKP08567 350 aaPredicted RBP17.41■□□□□ 0.38
TNRC18-202ENST00000399434 SOX5P35711 763 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 DSC1Q08554 894 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 HS1BP3Q53T59 392 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 SFMBT2Q5VUG0 894 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 SCARA5Q6ZMJ2 495 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 IRF2BP2Q7Z5L9 587 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 NPAS4Q8IUM7 802 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 LRRC52Q8N7C0 313 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 C3orf58Q8NDZ4 430 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 ZNF397Q8NF99 534 aaPredicted RBP17.41■□□□□ 0.38
TNRC18-202ENST00000399434 CASD1Q96PB1 797 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 BAG1Q99933 345 aaPredicted RBP17.41■□□□□ 0.38
TNRC18-202ENST00000399434 SMYD3Q9H7B4 428 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 SLC38A7Q9NVC3 462 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 TBC1D13Q9NVG8 400 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 ARHGAP20Q9P2F6 1191 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 HCSTQ9UBK5 93 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 PYCARDQ9ULZ3 195 aa17.41■□□□□ 0.38
TNRC18-202ENST00000399434 CASTOR2A6NHX0 329 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 SOWAHDA6NJG2 315 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 CCDC85CA6NKD9 419 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 GFPT2O94808 682 aa17.4■□□□□ 0.38
TNRC18-202ENST00000399434 SKILP12757 684 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms