RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 CEP89Q96ST8 783 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 OSBPL7Q9BZF2 842 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 KDM4CQ9H3R0 1056 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 ACAD9Q9H845 621 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 CHST7Q9NS84 486 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 INTS9Q9NV88 658 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 ASIC3Q9UHC3 531 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 AGO2Q9UKV8 859 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 SCAF8Q9UPN6 1271 aaKnown RBP12.12□□□□□ -0.47
C4orf3-201ENST00000399075 SCINQ9Y6U3 715 aa12.12□□□□□ -0.47
C4orf3-201ENST00000399075 MYH9P35579 1960 aaKnown RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 GOLGA6L7A0A1B0GV03 622 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 VNN1O95497 513 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 EGFRP00533 1210 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 POTEJP0CG39 1038 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 TBXAS1P24557 533 aaPredicted RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 ATP5DP30049 168 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 NOMO3P69849 1222 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 EN1Q05925 392 aaPredicted RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 ITIH4Q14624 930 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 ANKRD20A8PQ5CZ79 823 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 RHOT1Q8IXI2 618 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 ABRAQ8N0Z2 381 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 CCDC197Q8NCU1 140 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 BBOF1Q8ND07 529 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 CPA5Q8WXQ8 436 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 TRAIPQ9BWF2 469 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 TEX13BQ9BXU2 312 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 PORCNQ9H237 461 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 NEU2Q9Y3R4 380 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 C19orf81C9J6K1 198 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 ATG7O95352 703 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 PTPRAP18433 802 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 TNNI1P19237 187 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 ICAM3P32942 547 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 POLGP54098 1239 aaPredicted RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 NLRP11P59045 1033 aaKnown RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 C1QBPQ07021 282 aaKnown RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 CCNG2Q16589 344 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 PLEKHA7Q6IQ23 1121 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 CRELD2Q6UXH1 353 aaPredicted RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 DNAJC14Q6Y2X3 702 aaPredicted RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 PIGWQ7Z7B1 504 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 RELL1Q8IUW5 271 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 CCT6BQ92526 530 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 CGRRF1Q99675 332 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 DHX33Q9H6R0 707 aaKnown RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 MAFBQ9Y5Q3 323 aaPredicted RBP12.11□□□□□ -0.47
C4orf3-201ENST00000399075 LCTP09848 1927 aa12.11□□□□□ -0.47
C4orf3-201ENST00000399075 TTC4O95801 387 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 ATF2P15336 505 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 TMEM132BQ14DG7 1078 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 CNGA2Q16280 664 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 NAIF1Q69YI7 327 aaPredicted RBP12.1□□□□□ -0.47
C4orf3-201ENST00000399075 CCDC25Q86WR0 208 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 ANKS4BQ8N8V4 417 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 A1CFQ9NQ94 594 aaKnown RBP12.1□□□□□ -0.47
C4orf3-201ENST00000399075 PICK1Q9NRD5 415 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 SMIM23A6NLE4 172 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 OATP04181 439 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 CLTAP09496 248 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 ARL2P36404 184 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 MTERF2Q49AM1 385 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 NBPF12Q5TAG4 269 aaPredicted RBP12.1□□□□□ -0.47
C4orf3-201ENST00000399075 EXD1Q8NHP7 514 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 SLC16A10Q8TF71 515 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 ELMO3Q96BJ8 720 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 HERPUD2Q9BSE4 406 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 FOXP3Q9BZS1 431 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 IRAK4Q9NWZ3 460 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 RBAKQ9NYW8 714 aaPredicted RBP12.1□□□□□ -0.47
C4orf3-201ENST00000399075 HACL1Q9UJ83 578 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 PTPRJQ12913 1337 aa12.1□□□□□ -0.47
C4orf3-201ENST00000399075 RASSF9O75901 435 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ECM2O94769 699 aaPredicted RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 CALCAP01258 141 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 WNT7BP56706 349 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 MAMLD1Q13495 774 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 SNX1Q13596 522 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ARMC3Q5W041 872 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 CEP128Q6ZU80 1094 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 EXOC3L1Q86VI1 746 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 CCDC89Q8N998 374 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ATG4AQ8WYN0 398 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 NIFKQ9BYG3 293 aaKnown RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 PDGFDQ9GZP0 370 aaPredicted RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 NSRP1Q9H0G5 558 aaKnown RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 TMEM134Q9H6X4 195 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 APOBEC3GQ9HC16 384 aaKnown RBP12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ADAM22Q9P0K1 906 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 TELO2Q9Y4R8 837 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ADGRA2Q96PE1 1338 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 A0A0B4J269 797 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 GLRA2P23416 452 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 GNA15P30679 374 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 SLCO1A2P46721 670 aa12.09□□□□□ -0.47
C4orf3-201ENST00000399075 ITGA8P53708 1063 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms