RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 NUB1Q9Y5A7 615 aa17.93■□□□□ 0.46
CDH23-204ENST00000398792 ARL5CA6NH57 179 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 SOWAHDA6NJG2 315 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 CYP3A5P20815 502 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 IBSPP21815 317 aaPredicted RBP17.92■□□□□ 0.46
CDH23-204ENST00000398792 SOX5P35711 763 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 STAT1P42224 750 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 CUL2Q13617 745 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 TCTN1Q2MV58 587 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 GSTCDQ8NEC7 633 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 SHC3Q92529 594 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 ARID3AQ99856 593 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 NIF3L1Q9GZT8 377 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 VRTNQ9H8Y1 702 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 UBN1Q9NPG3 1134 aa17.92■□□□□ 0.46
CDH23-204ENST00000398792 PRDM5Q9NQX1 630 aaPredicted RBP17.92■□□□□ 0.46
CDH23-204ENST00000398792 KIAA0355O15063 1070 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 STAU1O95793 577 aaKnown RBP17.91■□□□□ 0.46
CDH23-204ENST00000398792 TBXAS1P24557 533 aaPredicted RBP17.91■□□□□ 0.46
CDH23-204ENST00000398792 ATICP31939 592 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 RFC2P35250 354 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 FAM189BP81408 668 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 RBP5P82980 135 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 SOX4Q06945 474 aaPredicted RBP17.91■□□□□ 0.46
CDH23-204ENST00000398792 HGSNATQ68CP4 663 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 ZSCAN30Q86W11 494 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 FMNL3Q8IVF7 1028 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 CHP1Q99653 195 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 ARHGAP20Q9P2F6 1191 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 AGAP1Q9UPQ3 857 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 ALPK3Q96L96 1907 aa17.91■□□□□ 0.46
CDH23-204ENST00000398792 TRIM43BA6NCK2 446 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 INPPL1O15357 1258 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 EOMESO95936 686 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 TIMP1P01033 207 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 FERP16591 822 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 KCNJ6P48051 423 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 SCNN1GP51170 649 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 DEFB128Q7Z7B8 93 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 TRIM43Q96BQ3 446 aaPredicted RBP17.9■□□□□ 0.46
CDH23-204ENST00000398792 SLC38A7Q9NVC3 462 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 R3HCC1Q9Y3T6 440 aaKnown RBP17.9■□□□□ 0.46
CDH23-204ENST00000398792 TET1Q8NFU7 2136 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 ANO9A1A5B4 782 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 FOXN3O00409 490 aaPredicted RBP17.9■□□□□ 0.46
CDH23-204ENST00000398792 PPEF2O14830 753 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 EVI5O60447 810 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 GFPT2O94808 682 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 SERPING1P05155 500 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 PRKCIP41743 596 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 ASPAP45381 313 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 AFF1P51825 1210 aaKnown RBP17.9■□□□□ 0.46
CDH23-204ENST00000398792 ARID5AQ03989 594 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 MTF1Q14872 753 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 NAB2Q15742 525 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 TDRD12Q587J7 1177 aaKnown RBP17.9■□□□□ 0.46
CDH23-204ENST00000398792 ZNF667Q5HYK9 610 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 C9orf57Q5W0N0 161 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 RAD9BQ6WBX8 426 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 IRF2BP2Q7Z5L9 587 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 LRRC52Q8N7C0 313 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 JAKMIP2Q96AA8 810 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 HPDLQ96IR7 371 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 GOLGA2P5Q9HBQ8 144 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 TMEM161AQ9NX61 479 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 MIOSQ9NXC5 875 aa17.9■□□□□ 0.46
CDH23-204ENST00000398792 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.9■□□□□ 0.46
CDH23-204ENST00000398792 LTBP2Q14767 1821 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 ENPP3O14638 875 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 THP07101 528 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 PLEKP08567 350 aaPredicted RBP17.89■□□□□ 0.45
CDH23-204ENST00000398792 ITGB8P26012 769 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 LRPAP1P30533 357 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 KLHL30Q0D2K2 578 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 CNKSR3Q6P9H4 555 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 FAM71AQ8IYT1 594 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 VWCEQ96DN2 955 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 FAXDC2Q96IV6 333 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 ELAC1Q9H777 363 aaKnown RBP17.89■□□□□ 0.45
CDH23-204ENST00000398792 NHEJ1Q9H9Q4 299 aaPredicted RBP17.89■□□□□ 0.45
CDH23-204ENST00000398792 MICAL3Q7RTP6 2002 aa17.89■□□□□ 0.45
CDH23-204ENST00000398792 SSU72P8A0A1W2PR75 194 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 PIRO00625 290 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 ACO1P21399 889 aaKnown RBP17.88■□□□□ 0.45
CDH23-204ENST00000398792 GRIK3Q13003 919 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 MAPK8IP2Q13387 824 aaPredicted RBP17.88■□□□□ 0.45
CDH23-204ENST00000398792 WDR72Q3MJ13 1102 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 GLB1LQ6UWU2 654 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 SCARA5Q6ZMJ2 495 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 UBR7Q8N806 425 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 ZNF560Q96MR9 790 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 BCO2Q9BYV7 579 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 POLIQ9UNA4 740 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 INPP5FQ9Y2H2 1132 aa17.88■□□□□ 0.45
CDH23-204ENST00000398792 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.87■□□□□ 0.45
CDH23-204ENST00000398792 OFD1O75665 1012 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 CCDC172P0C7W6 258 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 RAG1P15918 1043 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 MYO1EQ12965 1108 aa17.87■□□□□ 0.45
CDH23-204ENST00000398792 CLLU1OSQ5K130 101 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms