RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 SLC12A6Q9UHW9 1150 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 SCINQ9Y6U3 715 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 SRRM3A6NNA2 597 aaPredicted RBP14.75□□□□□ -0.05
PRAME-202ENST00000398743 THAP12O43422 761 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 MARK3P27448 753 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 IREB2P48200 963 aaKnown RBP14.75□□□□□ -0.05
PRAME-202ENST00000398743 CALCOCO2Q13137 446 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 MXD4Q14582 209 aaPredicted RBP14.75□□□□□ -0.05
PRAME-202ENST00000398743 SLMAPQ14BN4 828 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 LLGL1Q15334 1064 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 CDCA2Q69YH5 1023 aaPredicted RBP14.75□□□□□ -0.05
PRAME-202ENST00000398743 PHF13Q86YI8 300 aaPredicted RBP14.75□□□□□ -0.05
PRAME-202ENST00000398743 ZBTB8OSQ8IWT0 167 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 ART4Q93070 314 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 DDX27Q96GQ7 796 aaKnown RBP14.75□□□□□ -0.05
PRAME-202ENST00000398743 FAM107BQ9H098 131 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 CCDC113Q9H0I3 377 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 ELP3Q9H9T3 547 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 PTPRFP10586 1907 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 TTLL13PA6NNM8 815 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 NOP56O00567 594 aaKnown RBP14.74□□□□□ -0.05
PRAME-202ENST00000398743 PSTPIP1O43586 416 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 FAM189A1O60320 539 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 SLC25A27O95847 323 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 MAN1A1P33908 653 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 TNFSF9P41273 254 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 MAGOHP61326 146 aaKnown RBP14.74□□□□□ -0.05
PRAME-202ENST00000398743 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
PRAME-202ENST00000398743 PTP4A2Q12974 167 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 KCNV1Q6PIU1 500 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 ZBTB33Q86T24 672 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 EXOC8Q8IYI6 725 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 C1orf54Q8WWF1 131 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 GPR20Q99678 358 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 TSPYL1Q9H0U9 437 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 ASCC2Q9H1I8 757 aaPredicted RBP14.74□□□□□ -0.05
PRAME-202ENST00000398743 CNMDO75829 334 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 DDNO94850 711 aaPredicted RBP14.74□□□□□ -0.05
PRAME-202ENST00000398743 ARIH2O95376 493 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 ASS1P00966 412 aaKnown RBP14.74□□□□□ -0.05
PRAME-202ENST00000398743 SHBGP04278 402 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 SRGAP2CP0DJJ0 459 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 KRT17Q04695 432 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 LAMTOR4Q0VGL1 99 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 MAMLD1Q13495 774 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 SLC29A2Q14542 456 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 MAPK6Q16659 721 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 HSDL1Q3SXM5 330 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 PLEKHA7Q6IQ23 1121 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 MMS22LQ6ZRQ5 1243 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 RHOT1Q8IXI2 618 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 RNF149Q8NC42 400 aa14.74□□□□□ -0.05
PRAME-202ENST00000398743 RNF25Q96BH1 459 aaPredicted RBP14.74□□□□□ -0.05
PRAME-202ENST00000398743 ACO2Q99798 780 aaKnown RBP14.74□□□□□ -0.05
PRAME-202ENST00000398743 PAPPA2Q9BXP8 1791 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 DCDC2CA8MYV0 355 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 OGTO15294 1046 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 CST3P01034 146 aaPredicted RBP14.73□□□□□ -0.05
PRAME-202ENST00000398743 PRKCBP05771 671 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 PGK2P07205 417 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 RARGP13631 454 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 SSTR3P32745 418 aaPredicted RBP14.73□□□□□ -0.05
PRAME-202ENST00000398743 ZNF132P52740 706 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 CORO7P57737 925 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 SYDE1Q6ZW31 735 aaPredicted RBP14.73□□□□□ -0.05
PRAME-202ENST00000398743 B4GALNT4Q76KP1 1039 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.73□□□□□ -0.05
PRAME-202ENST00000398743 TRIM50Q86XT4 487 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 ERO1BQ86YB8 467 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 CCDC50Q8IVM0 306 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 C10orf67Q8IYJ2 551 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 GRK7Q8WTQ7 553 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 TLCD1Q96CP7 247 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 MTMR12Q9C0I1 747 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 C2orf40Q9H1Z8 148 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 LRRC4CQ9HCJ2 640 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 CHST7Q9NS84 486 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 PARVAQ9NVD7 372 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 LRRC37A2A6NM11 1700 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 TRIM66O15016 1216 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 TLR3O15455 904 aaKnown RBP14.73□□□□□ -0.05
PRAME-202ENST00000398743 CAND2O75155 1236 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 LGR5O75473 907 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 MCL1Q07820 350 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 MKRN4PQ13434 485 aaPredicted RBP14.73□□□□□ -0.05
PRAME-202ENST00000398743 SNX1Q13596 522 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 BYSLQ13895 437 aaKnown RBP14.73□□□□□ -0.05
PRAME-202ENST00000398743 SURF1Q15526 300 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 CELF3Q5SZQ8 465 aaKnown RBP14.73□□□□□ -0.05
PRAME-202ENST00000398743 PLPPR4Q7Z2D5 763 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 CROCCP2Q86T23 111 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 NLRP14Q86W24 1093 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 LRRC71Q8N4P6 559 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 UBR7Q8N806 425 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 ZNF606Q8WXB4 792 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 FAM212AQ96EL1 285 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 PGM2Q96G03 612 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 SEMA4AQ9H3S1 761 aa14.73□□□□□ -0.05
PRAME-202ENST00000398743 WHRNQ9P202 907 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms