RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 ZEB2O60315 1214 aa27.52■■■□□ 2
SHARPIN-202ENST00000398712 HSPA6P17066 643 aa27.52■■■□□ 2
SHARPIN-202ENST00000398712 CTNNA2P26232 953 aa27.52■■■□□ 2
SHARPIN-202ENST00000398712 MYL6P60660 151 aa27.52■■■□□ 2
SHARPIN-202ENST00000398712 TERF2Q15554 542 aa27.52■■■□□ 2
SHARPIN-202ENST00000398712 FAM71BQ8TC56 605 aa27.52■■■□□ 2
SHARPIN-202ENST00000398712 CPA5Q8WXQ8 436 aa27.52■■■□□ 2
SHARPIN-202ENST00000398712 DDX47Q9H0S4 455 aaKnown RBP27.52■■■□□ 2
SHARPIN-202ENST00000398712 PRDM10Q9NQV6 1147 aa27.52■■■□□ 2
SHARPIN-202ENST00000398712 ZHX1Q9UKY1 873 aaPredicted RBP27.52■■■□□ 2
SHARPIN-202ENST00000398712 A0A087WZ62 844 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 MMP3P08254 477 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 MCF2P10911 925 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 ITGA4P13612 1032 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 CTNNA1P35221 906 aaKnown RBP27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 CARSP49589 748 aaKnown RBP27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 ZNF132P52740 706 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 POU5F1Q01860 360 aaKnown RBP27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 DGKDQ16760 1214 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 SEL1L2Q5TEA6 688 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 LIN9Q5TKA1 542 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 CASKIN2Q8WXE0 1202 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 IFT81Q8WYA0 676 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 CYFIP2Q96F07 1278 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 VCPIP1Q96JH7 1222 aa27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 FDXACB1Q9BRP7 624 aaPredicted RBP27.51■■□□□ 1.99
SHARPIN-202ENST00000398712 THAP12O43422 761 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 IQCF3P0C7M6 154 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 OSTNP61366 133 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 PPFIA1Q13136 1202 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 CUL1Q13616 776 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 KYAT1Q16773 422 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 KRT35Q92764 455 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 ZSCAN5CA6NGD5 496 aaPredicted RBP27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 PEX5P50542 639 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 NOMO3P69849 1222 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 ZNF211Q13398 564 aaPredicted RBP27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 MON1BQ7L1V2 547 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 EFCAB13Q8IY85 973 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 NPLOC4Q8TAT6 608 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 BTBD6Q96KE9 485 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 ANAPC7Q9UJX3 599 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 NFU1Q9UMS0 254 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 PCDHA3Q9Y5H8 950 aa27.5■■□□□ 1.99
SHARPIN-202ENST00000398712 ESYT3A0FGR9 886 aa27.49■■□□□ 1.99
SHARPIN-202ENST00000398712 YWHAEP62258 255 aaKnown RBP27.49■■□□□ 1.99
SHARPIN-202ENST00000398712 GRIK4Q16099 956 aa27.49■■□□□ 1.99
SHARPIN-202ENST00000398712 AMHR2Q16671 573 aa27.49■■□□□ 1.99
SHARPIN-202ENST00000398712 ZNF699Q32M78 642 aa27.49■■□□□ 1.99
SHARPIN-202ENST00000398712 CDR2LQ86X02 465 aaPredicted RBP27.49■■□□□ 1.99
SHARPIN-202ENST00000398712 CEP120Q8N960 986 aa27.49■■□□□ 1.99
SHARPIN-202ENST00000398712 WHAMMQ8TF30 809 aa27.49■■□□□ 1.99
SHARPIN-202ENST00000398712 PLEKHA4Q9H4M7 779 aa27.49■■□□□ 1.99
SHARPIN-202ENST00000398712 VTNP04004 478 aa27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 PHF13Q86YI8 300 aaPredicted RBP27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 ZCCHC17Q9NP64 241 aaKnown RBP27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 BHMG1C9JSJ3 638 aaPredicted RBP27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 GPR25O00155 361 aa27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 CXCL8P10145 99 aa27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 RRM1P23921 792 aa27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 MARCKSL1P49006 195 aa27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 IRF5Q13568 498 aa27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 NLRP7Q8WX94 980 aa27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 PDZD7Q9H5P4 517 aa27.48■■□□□ 1.99
SHARPIN-202ENST00000398712 SLC1A1P43005 524 aa27.47■■□□□ 1.99
SHARPIN-202ENST00000398712 SCARA3Q6AZY7 606 aa27.47■■□□□ 1.99
SHARPIN-202ENST00000398712 ZNF606Q8WXB4 792 aa27.47■■□□□ 1.99
SHARPIN-202ENST00000398712 SCLT1Q96NL6 688 aa27.47■■□□□ 1.99
SHARPIN-202ENST00000398712 PLVAPQ9BX97 442 aa27.47■■□□□ 1.99
SHARPIN-202ENST00000398712 MRPL47Q9HD33 250 aaKnown RBP27.47■■□□□ 1.99
SHARPIN-202ENST00000398712 CISHQ9NSE2 258 aa27.47■■□□□ 1.99
SHARPIN-202ENST00000398712 ADAM22Q9P0K1 906 aa27.47■■□□□ 1.99
SHARPIN-202ENST00000398712 AMACRQ9UHK6 382 aa27.47■■□□□ 1.99
SHARPIN-202ENST00000398712 KAT6AQ92794 2004 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 MROH7Q68CQ1 1323 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 GOLGA6BA6NDN3 693 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 STAG3L1P0CL83 205 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 RWDD2BP57060 319 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 C1QBPQ07021 282 aaKnown RBP27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 ZNF410Q86VK4 478 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 PASD1Q8IV76 773 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 FAXDC2Q96IV6 333 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 PPP1R16BQ96T49 567 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 XYLT2Q9H1B5 865 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 SCINQ9Y6U3 715 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 MGAMO43451 1857 aa27.46■■□□□ 1.99
SHARPIN-202ENST00000398712 RRN3P2A6NIE6 340 aa27.45■■□□□ 1.99
SHARPIN-202ENST00000398712 HUNKP57058 714 aa27.45■■□□□ 1.99
SHARPIN-202ENST00000398712 ALS2CLQ60I27 953 aa27.45■■□□□ 1.99
SHARPIN-202ENST00000398712 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.45■■□□□ 1.99
SHARPIN-202ENST00000398712 CPA4Q9UI42 421 aa27.45■■□□□ 1.99
SHARPIN-202ENST00000398712 MYO1FO00160 1098 aa27.45■■□□□ 1.98
SHARPIN-202ENST00000398712 LSM8O95777 96 aaKnown RBP27.45■■□□□ 1.98
SHARPIN-202ENST00000398712 CD58P19256 250 aa27.45■■□□□ 1.98
SHARPIN-202ENST00000398712 MORN1Q5T089 497 aa27.45■■□□□ 1.98
SHARPIN-202ENST00000398712 CST9Q5W186 159 aa27.45■■□□□ 1.98
SHARPIN-202ENST00000398712 TMEM192Q8IY95 271 aa27.45■■□□□ 1.98
SHARPIN-202ENST00000398712 C11orf70Q9BRQ4 267 aa27.45■■□□□ 1.98
SHARPIN-202ENST00000398712 ASB7Q9H672 318 aa27.45■■□□□ 1.98
SHARPIN-202ENST00000398712 UTP11Q9Y3A2 253 aaKnown RBP27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms