RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 TSPAN18Q96SJ8 248 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 NGRNQ9NPE2 291 aaKnown RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 SF3B1O75533 1304 aaKnown RBP eCLIP17.06■□□□□ 0.329e-6■■■■■ 68.9
MBD1-207ENST00000398488 LRRIQ3A6PVS8 624 aaPredicted RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 ADAM12O43184 909 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 CLASP2O75122 1294 aaKnown RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 GLP2RO95838 553 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 CNPP09543 421 aaKnown RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 CCNE1P24864 410 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 CA8P35219 290 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 LTBRP36941 435 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 GLUD2P49448 558 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 AARSP49588 968 aaKnown RBP eCLIP17.06■□□□□ 0.32
MBD1-207ENST00000398488 DLX2Q07687 328 aaPredicted RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 DUSP6Q16828 381 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 EDRF1Q3B7T1 1238 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 TTI2Q6NXR4 508 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 CEP57Q86XR8 500 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 LNX1Q8TBB1 728 aaPredicted RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 FEZF2Q8TBJ5 459 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 PARD3BQ8TEW8 1205 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 NELFBQ8WX92 580 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 RIN2Q8WYP3 895 aaPredicted RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 DHTKD1Q96HY7 919 aaPredicted RBP17.06■□□□□ 0.32
MBD1-207ENST00000398488 KLHL5Q96PQ7 755 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 TLE6Q9H808 572 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 TMEM63CQ9P1W3 806 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 CTNND2Q9UQB3 1225 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 IRAK3Q9Y616 596 aa17.06■□□□□ 0.32
MBD1-207ENST00000398488 SLC34A2O95436 690 aa17.05■□□□□ 0.32
MBD1-207ENST00000398488 ITGB3P05106 788 aa17.05■□□□□ 0.32
MBD1-207ENST00000398488 POLR2BP30876 1174 aaKnown RBP17.05■□□□□ 0.32
MBD1-207ENST00000398488 LILRA4P59901 499 aa17.05■□□□□ 0.32
MBD1-207ENST00000398488 KCNC3Q14003 757 aa17.05■□□□□ 0.32
MBD1-207ENST00000398488 COL19A1Q14993 1142 aa17.05■□□□□ 0.32
MBD1-207ENST00000398488 USP41Q3LFD5 358 aa17.05■□□□□ 0.32
MBD1-207ENST00000398488 PDE12Q6L8Q7 609 aaKnown RBP17.05■□□□□ 0.32
MBD1-207ENST00000398488 RBM43Q6ZSC3 357 aaKnown RBP17.05■□□□□ 0.32
MBD1-207ENST00000398488 TRIML1Q8N9V2 468 aa17.05■□□□□ 0.32
MBD1-207ENST00000398488 ELMO3Q96BJ8 720 aa17.05■□□□□ 0.32
MBD1-207ENST00000398488 CGRRF1Q99675 332 aa17.05■□□□□ 0.32
MBD1-207ENST00000398488 AGAP1Q9UPQ3 857 aa17.05■□□□□ 0.32
MBD1-207ENST00000398488 TIMM13Q9Y5L4 95 aaPredicted RBP17.05■□□□□ 0.32
MBD1-207ENST00000398488 XPOTO43592 962 aaKnown RBP17.04■□□□□ 0.32
MBD1-207ENST00000398488 CST3P01034 146 aaPredicted RBP17.04■□□□□ 0.32
MBD1-207ENST00000398488 URODP06132 367 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 SKIV2LQ15477 1246 aaKnown RBP17.04■□□□□ 0.32
MBD1-207ENST00000398488 CTC1Q2NKJ3 1217 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 DPCR1Q3MIW9 517 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 TRAPPC11Q7Z392 1133 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 NT5DC4Q86YG4 428 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 WDR49Q8IV35 697 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 CSGALNACT2Q8N6G5 542 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 SUSD3Q96L08 255 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 TTPALQ9BTX7 342 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 RXFP1Q9HBX9 757 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 MRPL17Q9NRX2 175 aaKnown RBP17.04■□□□□ 0.32
MBD1-207ENST00000398488 NUB1Q9Y5A7 615 aa17.04■□□□□ 0.32
MBD1-207ENST00000398488 BRWD1Q9NSI6 2320 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 M0QZQ0 153 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 PSMA7O14818 248 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 TEX28O15482 410 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 MBD3O95983 291 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 TMEM191BP0C7N4 346 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 TRIM49P0CI25 452 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 TRIM49CP0CI26 452 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 TNNI1P19237 187 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 CLDN10P78369 228 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 ADAM15Q13444 863 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 DUOXA2Q1HG44 320 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 LLGL2Q6P1M3 1020 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.03■□□□□ 0.32
MBD1-207ENST00000398488 GLYCTKQ8IVS8 523 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 FAM186BQ8IYM0 893 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 SLC22A17Q8WUG5 538 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 CLSTN3Q9BQT9 956 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 GTPBP4Q9BZE4 634 aaKnown RBP17.03■□□□□ 0.32
MBD1-207ENST00000398488 FRMD4BQ9Y2L6 1034 aa17.03■□□□□ 0.32
MBD1-207ENST00000398488 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.02■□□□□ 0.32
MBD1-207ENST00000398488 TBX10O75333 385 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 C4BPAP04003 597 aaKnown RBP17.02■□□□□ 0.32
MBD1-207ENST00000398488 EPCAMP16422 314 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 TFF2Q03403 129 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 PPP3CAQ08209 521 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 SURF1Q15526 300 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 TDRD10Q5VZ19 366 aaKnown RBP17.02■□□□□ 0.32
MBD1-207ENST00000398488 KIAA1841Q6NSI8 718 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 EFHBQ8N7U6 833 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 CACTINQ8WUQ7 758 aaKnown RBP17.02■□□□□ 0.32
MBD1-207ENST00000398488 PIK3R5Q8WYR1 880 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 SENP8Q96LD8 212 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 FNBP1Q96RU3 617 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 CLEC1BQ9P126 229 aa17.02■□□□□ 0.32
MBD1-207ENST00000398488 CETN3O15182 167 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 TBC1D4O60343 1298 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 LRRN2O75325 713 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 VNN1O95497 513 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 KRT19P08727 400 aa17.01■□□□□ 0.31
MBD1-207ENST00000398488 RPL13P26373 211 aaKnown RBP17.01■□□□□ 0.31
MBD1-207ENST00000398488 PSMC2P35998 433 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms