RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 MAGEA9P43362 315 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 ADCY1Q08828 1119 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 GRM2Q14416 872 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 SEZ6Q53EL9 994 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 TPGS2Q68CL5 300 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 MPZL3Q6UWV2 235 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 ZNF852Q6ZMS4 543 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 DGLUCYQ7Z3D6 616 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 MAP4K3Q8IVH8 894 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 DDX12PQ92771 950 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 ASB16Q96NS5 453 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 KIF2CQ99661 725 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 TCHPQ9BT92 498 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 ZFP14Q9HCL3 533 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 ZSCAN32Q9NX65 697 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 PCDHGA2Q9Y5H1 932 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 INSL5Q9Y5Q6 135 aa13.17□□□□□ -0.3
TFF3-202ENST00000398431 NCANO14594 1321 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 H7C4K7 107 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 ZNF197O14709 1029 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 SPTLC1O15269 473 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 NCAM2O15394 837 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 VNN2O95498 520 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 TDGF1P13385 188 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 GJA1P17302 382 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 EPHA5P54756 1037 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 MTAPQ13126 283 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 DMP1Q13316 513 aaPredicted RBP13.16□□□□□ -0.3
TFF3-202ENST00000398431 ZBTB6Q15916 424 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 RSPO4Q2I0M5 234 aaPredicted RBP13.16□□□□□ -0.3
TFF3-202ENST00000398431 CTXN3Q4LDR2 81 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 VITQ6UXI7 678 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 RNF19BQ6ZMZ0 732 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 MAMSTRQ6ZN01 415 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 TMEM161BQ8NDZ6 487 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 BEST2Q8NFU1 509 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 ATRIPQ8WXE1 791 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 DNASE1L2Q92874 299 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 PNMA5Q96PV4 448 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 HINFPQ9BQA5 517 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 LRRC3Q9BY71 257 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 HAPLN2Q9GZV7 340 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 C17orf75Q9HAS0 396 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 ZNF334Q9HCZ1 680 aaPredicted RBP13.16□□□□□ -0.3
TFF3-202ENST00000398431 PRMT8Q9NR22 394 aaPredicted RBP13.16□□□□□ -0.3
TFF3-202ENST00000398431 AFF4Q9UHB7 1163 aaKnown RBP13.16□□□□□ -0.3
TFF3-202ENST00000398431 NOL7Q9UMY1 257 aaKnown RBP13.16□□□□□ -0.3
TFF3-202ENST00000398431 STK24Q9Y6E0 443 aa13.16□□□□□ -0.3
TFF3-202ENST00000398431 PDCD11Q14690 1871 aaKnown RBP13.15□□□□□ -0.3
TFF3-202ENST00000398431 GUCY2CP25092 1073 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 VIPR2P41587 438 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 HMGN5P82970 282 aaKnown RBP13.15□□□□□ -0.3
TFF3-202ENST00000398431 TWF1Q12792 350 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 KRT79Q5XKE5 535 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 SPIRE2Q8WWL2 714 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 SMARCD2Q92925 531 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 ZSCAN31Q96LW9 406 aaPredicted RBP13.15□□□□□ -0.3
TFF3-202ENST00000398431 DRC1Q96MC2 740 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 ZNF512Q96ME7 567 aaPredicted RBP13.15□□□□□ -0.3
TFF3-202ENST00000398431 TRMT61BQ9BVS5 477 aaKnown RBP13.15□□□□□ -0.3
TFF3-202ENST00000398431 EPC1Q9H2F5 836 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 BRD9Q9H8M2 597 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 TRPV5Q9NQA5 729 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.15□□□□□ -0.3
TFF3-202ENST00000398431 TUBGCP4Q9UGJ1 667 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 PCDHB8Q9UN66 801 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 MRPS17Q9Y2R5 130 aaKnown RBP13.15□□□□□ -0.3
TFF3-202ENST00000398431 NUB1Q9Y5A7 615 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 COL4A2P08572 1712 aa13.15□□□□□ -0.3
TFF3-202ENST00000398431 M0QZQ0 153 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 ARNTLO00327 626 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 TOM1L1O75674 476 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 OAZ2O95190 189 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 HARSP12081 509 aaKnown RBP13.14□□□□□ -0.31
TFF3-202ENST00000398431 PSMC3P17980 439 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 LRPAP1P30533 357 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 MCM4P33991 863 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 PRPHP41219 470 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 SPAG1Q07617 926 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 RAD51AP2Q09MP3 1159 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 C8orf34Q49A92 452 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 HYIQ5T013 277 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 CYP4A22Q5TCH4 519 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 PDZD4Q76G19 769 aaPredicted RBP13.14□□□□□ -0.31
TFF3-202ENST00000398431 SYT2Q8N9I0 419 aaPredicted RBP13.14□□□□□ -0.31
TFF3-202ENST00000398431 IRF7Q92985 503 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 RSPRY1Q96DX4 576 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 CHRDQ9H2X0 955 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 LMAN1LQ9HAT1 526 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 TRPV4Q9HBA0 871 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 MAFFQ9ULX9 164 aa13.14□□□□□ -0.31
TFF3-202ENST00000398431 NDRG2Q9UN36 371 aaKnown RBP13.14□□□□□ -0.31
TFF3-202ENST00000398431 TIMM13Q9Y5L4 95 aaPredicted RBP13.14□□□□□ -0.31
TFF3-202ENST00000398431 TTC26A0AVF1 554 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 LAD1O00515 517 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 MAN2B1O00754 1011 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 OR4Q2P0C623 313 aa13.13□□□□□ -0.31
TFF3-202ENST00000398431 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms