RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 DPCR1Q3MIW9 517 aa27.58■■■□□ 2.01
U2AF1-203ENST00000398137 XXYLT1Q8NBI6 393 aa27.58■■■□□ 2.01
U2AF1-203ENST00000398137 RABGGTAQ92696 567 aa27.58■■■□□ 2.01
U2AF1-203ENST00000398137 FAM212AQ96EL1 285 aa27.58■■■□□ 2.01
U2AF1-203ENST00000398137 PAAF1Q9BRP4 392 aa27.58■■■□□ 2.01
U2AF1-203ENST00000398137 CNTN3Q9P232 1028 aa27.58■■■□□ 2.01
U2AF1-203ENST00000398137 CITO14578 2027 aa27.58■■■□□ 2.01
U2AF1-203ENST00000398137 C2orf16Q68DN1 1984 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 TRIM49BA6NDI0 452 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 TULP1O00294 542 aaPredicted RBP27.57■■■□□ 2
U2AF1-203ENST00000398137 EXOC3O60645 756 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 CLCN4P51793 760 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 PMS1P54277 932 aaKnown RBP27.57■■■□□ 2
U2AF1-203ENST00000398137 NLRP12P59046 1061 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 ITIH3Q06033 890 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 GRIK3Q13003 919 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 RARS2Q5T160 578 aaKnown RBP27.57■■■□□ 2
U2AF1-203ENST00000398137 KIAA0319Q5VV43 1072 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 CENPPQ6IPU0 288 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 ALKAL1Q6UXT8 129 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 CBWD2Q8IUF1 395 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 NELFBQ8WX92 580 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 EDAQ92838 391 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 DHTKD1Q96HY7 919 aaPredicted RBP27.57■■■□□ 2
U2AF1-203ENST00000398137 TSG101Q99816 390 aa27.57■■■□□ 2
U2AF1-203ENST00000398137 RBAKQ9NYW8 714 aaPredicted RBP27.57■■■□□ 2
U2AF1-203ENST00000398137 TTC26A0AVF1 554 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 LACTBL1A8MY62 500 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 ADRB2P07550 413 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 SP100P23497 879 aaPredicted RBP27.56■■■□□ 2
U2AF1-203ENST00000398137 CCNE1P24864 410 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 SPAG1Q07617 926 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 NAB2Q15742 525 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 SKOR2Q2VWA4 1001 aaPredicted RBP27.56■■■□□ 2
U2AF1-203ENST00000398137 XKR4Q5GH76 650 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 SLC9A9Q8IVB4 645 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 BRSK2Q8IWQ3 736 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 GPR62Q9BZJ7 368 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 PLEKHA5Q9HAU0 1116 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 DMAC2Q9NW81 257 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 STK39Q9UEW8 545 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 TRIP11Q15643 1979 aa27.56■■■□□ 2
U2AF1-203ENST00000398137 SMIM28A0A1B0GU29 152 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 C2CD2LO14523 706 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 NR2F2P24468 414 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 PAK1Q13153 545 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 SNRNP35Q16560 246 aaKnown RBP27.55■■■□□ 2
U2AF1-203ENST00000398137 EDRF1Q3B7T1 1238 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 ANKRD40Q6AI12 368 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 HFE2Q6ZVN8 426 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 MLKLQ8NB16 471 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 RDH13Q8NBN7 331 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 B3GALT6Q96L58 329 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 FBXL18Q96ME1 805 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 ZMAT2Q96NC0 199 aaKnown RBP27.55■■■□□ 2
U2AF1-203ENST00000398137 KIAA1586Q9HCI6 787 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 MRPL17Q9NRX2 175 aaKnown RBP27.55■■■□□ 2
U2AF1-203ENST00000398137 CHST7Q9NS84 486 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 DZANK1Q9NVP4 752 aa27.55■■■□□ 2
U2AF1-203ENST00000398137 ZNF233A6NK53 670 aa27.54■■■□□ 2
U2AF1-203ENST00000398137 THP07101 528 aa27.54■■■□□ 2
U2AF1-203ENST00000398137 KCNE1P15382 129 aa27.54■■■□□ 2
U2AF1-203ENST00000398137 WNT7BP56706 349 aa27.54■■■□□ 2
U2AF1-203ENST00000398137 STX17P56962 302 aa27.54■■■□□ 2
U2AF1-203ENST00000398137 LRRC63Q05C16 580 aa27.54■■■□□ 2
U2AF1-203ENST00000398137 NFIL3Q16649 462 aa27.54■■■□□ 2
U2AF1-203ENST00000398137 CEP135Q66GS9 1140 aa27.54■■■□□ 2
U2AF1-203ENST00000398137 SASS6Q6UVJ0 657 aa27.54■■■□□ 2
U2AF1-203ENST00000398137 PPP1R10Q96QC0 940 aaKnown RBP27.54■■■□□ 2
U2AF1-203ENST00000398137 TEX28O15482 410 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 KLRC2P26717 231 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 CASP4P49662 377 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 ZXDAP98168 799 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 DSG1Q02413 1049 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 MYBPC2Q14324 1141 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 JADE1Q6IE81 842 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 KIAA1841Q6NSI8 718 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 CES5AQ6NT32 575 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 PPFIBP1Q86W92 1011 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 KIF12Q96FN5 646 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 EEF2KMTQ96G04 330 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 COLEC11Q9BWP8 271 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 EMILIN2Q9BXX0 1053 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 RXFP1Q9HBX9 757 aa27.53■■■□□ 2
U2AF1-203ENST00000398137 ZNF318Q5VUA4 2279 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 MYO10Q9HD67 2058 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 C2CD4DB7Z1M9 353 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 IL18RAPO95256 599 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 URODP06132 367 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 NFICP08651 508 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 RPL13P26373 211 aaKnown RBP27.52■■■□□ 2
U2AF1-203ENST00000398137 GLUD2P49448 558 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 POU5F1Q01860 360 aaKnown RBP27.52■■■□□ 2
U2AF1-203ENST00000398137 HSP90AA2PQ14568 343 aaPredicted RBP27.52■■■□□ 2
U2AF1-203ENST00000398137 TTI2Q6NXR4 508 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 FUT10Q6P4F1 479 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 TMC5Q6UXY8 1006 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 CD302Q8IX05 232 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 TMEM174Q8WUU8 243 aa27.52■■■□□ 2
U2AF1-203ENST00000398137 C18orf25Q96B23 403 aaPredicted RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms