RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ZC3H11AO75152 810 aaKnown RBP eCLIP20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 KRT19P08727 400 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 LINC00271P0C7V0 271 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 SLC11A1P49279 550 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 UBXN1Q04323 297 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 GBP6Q6ZN66 633 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 FIBCD1Q8N539 461 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 LRRC52Q8N7C0 313 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 LMO3Q8TAP4 145 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 XYLT2Q9H1B5 865 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 RAB20Q9NX57 234 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 GCNT4Q9P109 453 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 SCN1AP35498 2009 aa20.97■□□□□ 0.95
MAP1LC3A-203ENST00000397709 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 TMEM189-UBE2V1I3L0A0 370 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 CBFA2T2O43439 604 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 LRRN2O75325 713 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 STAU1O95793 577 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 GALTP07902 379 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 ATICP31939 592 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 OR1G1P47890 313 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 BCAR1P56945 870 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 MYL6P60660 151 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 KCNMA1Q12791 1236 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 EXOC3L4Q17RC7 722 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 CD300LGQ6UXG3 332 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 EHBP1Q8NDI1 1231 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 C3orf58Q8NDZ4 430 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 ZNF560Q96MR9 790 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 ERGIC2Q96RQ1 377 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 XPO4Q9C0E2 1151 aaKnown RBP20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 VRTNQ9H8Y1 702 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 PCDHA11Q9Y5I1 949 aa20.96■□□□□ 0.95
MAP1LC3A-203ENST00000397709 NRP1O14786 923 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ASS1P00966 412 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 LAG3P18627 525 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 IGFBP6P24592 240 aaPredicted RBP20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PNPLA4P41247 253 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SGSM1Q2NKQ1 1148 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 DCLRE1AQ6PJP8 1040 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 RABGGTAQ92696 567 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 TAF4BQ92750 862 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 CLP1Q92989 425 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 HPDLQ96IR7 371 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 CRACR2AQ9BSW2 395 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 INTS2Q9H0H0 1204 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 GRPEL1Q9HAV7 217 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 MARCH5Q9NX47 278 aa20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PRG3Q9Y2Y8 225 aaPredicted RBP20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 R3HCC1Q9Y3T6 440 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3A-203ENST00000397709 CARNS1A5YM72 827 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 KIF4AO95239 1232 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ALDH2P05091 517 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 MYOGP15173 224 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PON1P27169 355 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PBX1P40424 430 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 TAF6P49848 677 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PLCB2Q00722 1185 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 MYO1EQ12965 1108 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 GSE1Q14687 1217 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ZNF699Q32M78 642 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SPOUT1Q5T280 376 aaKnown RBP20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 DPY19L2P1Q6NXN4 242 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 COLGALT1Q8NBJ5 622 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ZNF558Q96NG5 402 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PI4K2AQ9BTU6 479 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SIK3Q9Y2K2 1263 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 FAN1Q9Y2M0 1017 aa20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 RANBP2P49792 3224 aaKnown RBP20.94■□□□□ 0.94
MAP1LC3A-203ENST00000397709 A0A1W2PQC6 194 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 LINC01553A4QN01 128 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 F8W810 466 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SPTLC1O15269 473 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 B3GAT3O94766 335 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ITGB1P05556 798 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 TPM3P06753 285 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SLC9A1P19634 815 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PAX3P23760 479 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PBX3P40426 434 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 AARSP49588 968 aaKnown RBP eCLIP20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 LILRA4P59901 499 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 NOP14P78316 857 aaKnown RBP20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SYCP1Q15431 976 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 SV2CQ496J9 727 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 TRIM65Q6PJ69 517 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 KCNT2Q6UVM3 1135 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 CCDC150Q8NCX0 1101 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 COLEC11Q9BWP8 271 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PBX4Q9BYU1 374 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 IMPG2Q9BZV3 1241 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 TRIM5Q9C035 493 aa20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 APOBEC3GQ9HC16 384 aaKnown RBP20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 YBX2Q9Y2T7 364 aaKnown RBP20.93■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ARHGEF15O94989 841 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PBX2P40425 430 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 ALDH7A1P49419 539 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 KLK7P49862 253 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 RAB30Q15771 203 aa20.92■□□□□ 0.94
MAP1LC3A-203ENST00000397709 PTPN21Q16825 1174 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms