RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 KLK7P49862 253 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 KCNA1Q09470 495 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 BTBD8Q5XKL5 378 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 UBLCP1Q8WVY7 318 aaPredicted RBP8.79□□□□□ -1
PTPRD-204ENST00000397606 ZBTB45Q96K62 511 aaPredicted RBP8.79□□□□□ -1
PTPRD-204ENST00000397606 TMEM117Q9H0C3 514 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 CARNS1A5YM72 827 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 EFCAB8A8MWE9 144 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 H7C4K7 107 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 IVLP07476 585 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 RALAP11233 206 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 KRT3P12035 628 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 TFDP2Q14188 446 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 CCL14Q16627 93 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 TADA2BQ86TJ2 420 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 SREK1Q8WXA9 508 aaKnown RBP8.79□□□□□ -1
PTPRD-204ENST00000397606 PCDHA2Q9Y5H9 948 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 ZNF862O60290 1169 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 ALDH2P05091 517 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 AKAP5P24588 427 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 MYL6P60660 151 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 IKBKEQ14164 716 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 NAB2Q15742 525 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 ACO2Q99798 780 aaKnown RBP8.79□□□□□ -1
PTPRD-204ENST00000397606 TSPYL1Q9H0U9 437 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 ZWILCHQ9H900 591 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 PIDD1Q9HB75 910 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 FAM49BQ9NUQ9 324 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 ADAMTS5Q9UNA0 930 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 ZMYM2Q9UBW7 1377 aa8.79□□□□□ -1
PTPRD-204ENST00000397606 CYB561D2O14569 222 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 AMHP03971 560 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 CDK17Q00537 523 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 CROCCP2Q86T23 111 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 KIAA0319LQ8IZA0 1049 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 NPLOC4Q8TAT6 608 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 PLEKHA5Q9HAU0 1116 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 NR2E3Q9Y5X4 410 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 ADAMTS3O15072 1205 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 FAM200BP0CF97 657 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 LCP1P13796 627 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 LHX1P48742 406 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 LRRC31Q6UY01 552 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 HDXQ7Z353 690 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 GLIS3Q8NEA6 775 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 RRAGDQ9NQL2 400 aaPredicted RBP8.78□□□□□ -1
PTPRD-204ENST00000397606 USP20Q9Y2K6 914 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 LACTBL1A8MY62 500 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 FOXN3O00409 490 aaPredicted RBP8.78□□□□□ -1
PTPRD-204ENST00000397606 OPLAHO14841 1288 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 TJP3O95049 919 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 VDRP11473 427 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 EZRP15311 586 aaKnown RBP8.78□□□□□ -1
PTPRD-204ENST00000397606 ARHGAP1Q07960 439 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 GJB7Q6PEY0 223 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 NECAB2Q7Z6G3 386 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 TMEM199Q8N511 208 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 CCNYQ8ND76 341 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 ST6GALNAC4Q9H4F1 302 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 CHST12Q9NRB3 414 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 SEPT10Q9P0V9 454 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 FAN1Q9Y2M0 1017 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 COL24A1Q17RW2 1714 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 MYH7P12883 1935 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 TLDC2A0PJX2 215 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 RECQL4O94761 1208 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 ATF2P15336 505 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 SLC1A1P43005 524 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 ZNF131P52739 623 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 GALCP54803 685 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 SNX17Q15036 470 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 PPP6R3Q5H9R7 873 aaPredicted RBP8.78□□□□□ -1
PTPRD-204ENST00000397606 CASC4Q6P4E1 433 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 PPP1R21Q6ZMI0 780 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 RHOT1Q8IXI2 618 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 PLCD3Q8N3E9 789 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 MYRIPQ8NFW9 859 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 CDT1Q9H211 546 aa8.78□□□□□ -1
PTPRD-204ENST00000397606 ASTN1O14525 1302 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 CCDC66A2RUB6 948 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 LRRC10BA6NIK2 292 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 PRRG1O14668 218 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 DHX15O43143 795 aaKnown RBP8.77□□□□□ -1
PTPRD-204ENST00000397606 PARNO95453 639 aaKnown RBP8.77□□□□□ -1
PTPRD-204ENST00000397606 APOEP02649 317 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 DARSP14868 501 aaKnown RBP8.77□□□□□ -1
PTPRD-204ENST00000397606 CXCR5P32302 372 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 GCNT1Q02742 428 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 ITKQ08881 620 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 PAN2Q504Q3 1202 aaKnown RBP8.77□□□□□ -1
PTPRD-204ENST00000397606 C12orf56Q8IXR9 622 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 ADGRF2Q8IZF7 708 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 TTC13Q8NBP0 860 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 CCHCR1Q8TD31 782 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 CPA5Q8WXQ8 436 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 HSPH1Q92598 858 aa8.77□□□□□ -1
PTPRD-204ENST00000397606 UMODL1Q5DID0 1318 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 ARL2P36404 184 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 VPS41P49754 854 aa8.77□□□□□ -1.01
PTPRD-204ENST00000397606 DYNLT1P63172 113 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms