RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ARHGEF19Q8IW93 802 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 CCAR2Q8N163 923 aaKnown RBP20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 ADAM2Q99965 735 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 GPR88Q9GZN0 384 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 CNTN6Q9UQ52 1028 aa20.43■□□□□ 0.86
TSPAN4-204ENST00000397404 CXCL10P02778 98 aa20.42■□□□□ 0.86
TSPAN4-204ENST00000397404 ITGB3P05106 788 aa20.42■□□□□ 0.86
TSPAN4-204ENST00000397404 FAM189BP81408 668 aa20.42■□□□□ 0.86
TSPAN4-204ENST00000397404 SLC18A3Q16572 532 aa20.42■□□□□ 0.86
TSPAN4-204ENST00000397404 ARHGAP44Q17R89 818 aa20.42■□□□□ 0.86
TSPAN4-204ENST00000397404 PLEKHG4Q58EX7 1191 aa20.42■□□□□ 0.86
TSPAN4-204ENST00000397404 CHP1Q99653 195 aa20.42■□□□□ 0.86
TSPAN4-204ENST00000397404 TSGA10Q9BZW7 698 aa20.42■□□□□ 0.86
TSPAN4-204ENST00000397404 XYLT2Q9H1B5 865 aa20.42■□□□□ 0.86
TSPAN4-204ENST00000397404 ADGRG1Q9Y653 693 aa20.42■□□□□ 0.86
TSPAN4-204ENST00000397404 PDCD11Q14690 1871 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 FOXN3O00409 490 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 MEFVO15553 781 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 CST3P01034 146 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 THP07101 528 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 KRT19P08727 400 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 LRPAP1P30533 357 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 RPL9P32969 192 aaKnown RBP20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 KIF11P52732 1056 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 MYL6P60660 151 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 TLE2Q04725 743 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 FAAP100Q0VG06 881 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 ASTE1Q2TB18 679 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 E4F1Q66K89 784 aaPredicted RBP20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 RAD9BQ6WBX8 426 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 CXorf38Q8TB03 319 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 KREMEN1Q96MU8 473 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 RSAD1Q9HA92 442 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 KANSL3Q9P2N6 904 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 SIX4Q9UIU6 781 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 PPP2R2CQ9Y2T4 447 aa20.41■□□□□ 0.86
TSPAN4-204ENST00000397404 TANC1Q9C0D5 1861 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 ANO9A1A5B4 782 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 HOXA2O43364 376 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 CLTBP09497 229 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 AKAP5P24588 427 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 EIF4A3P38919 411 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 PDE6CP51160 858 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 APBA1Q02410 837 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 PTK2Q05397 1052 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 MBTPS1Q14703 1052 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 GJB7Q6PEY0 223 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 ECHDC2Q86YB7 292 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 TATDN2Q93075 761 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 HPDLQ96IR7 371 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 UROC1Q96N76 676 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 PPP1R10Q96QC0 940 aaKnown RBP20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 BCO2Q9BYV7 579 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 HAUS4Q9H6D7 363 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 TBX21Q9UL17 535 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 HES2Q9Y543 173 aa20.4■□□□□ 0.86
TSPAN4-204ENST00000397404 C9IYK1 514 aa20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 POLR2BP30876 1174 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 ATN1P54259 1190 aaPredicted RBP20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 TRIM60Q495X7 471 aa20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 ZNF598Q86UK7 904 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 DDX27Q96GQ7 796 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 APOL6Q9BWW8 343 aa20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 APOBEC3GQ9HC16 384 aaKnown RBP20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 AGAP1Q9UPQ3 857 aa20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 NUB1Q9Y5A7 615 aa20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 UMODL1Q5DID0 1318 aa20.39■□□□□ 0.85
TSPAN4-204ENST00000397404 ARHGEF37A1IGU5 675 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 PIRO00625 290 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 EFCAB14O75071 495 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 CAPN15O75808 1086 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 CLSTN1O94985 981 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 PFKMP08237 780 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 TNNC1P63316 161 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 GRIK3Q13003 919 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 WDR72Q3MJ13 1102 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 SV2CQ496J9 727 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 DPH6Q7L8W6 267 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 CALR3Q96L12 384 aaKnown RBP20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 ZMAT2Q96NC0 199 aaKnown RBP20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 PI4K2AQ9BTU6 479 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 TMEM161AQ9NX61 479 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 MYO1AQ9UBC5 1043 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 INTUQ9ULD6 942 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 DNAH12Q6ZR08 3092 aa20.38■□□□□ 0.85
TSPAN4-204ENST00000397404 ARL5CA6NH57 179 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 KRT86O43790 486 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 LRRN2O75325 713 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 ARID5AQ03989 594 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 C9orf57Q5W0N0 161 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 GLB1LQ6UWU2 654 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 TOGARAM2Q6ZUX3 1019 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 SPATA18Q8TC71 538 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 PAWRQ96IZ0 340 aaKnown RBP20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 RNF39Q9H2S5 420 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 TMEM39AQ9NV64 488 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 GDAP2Q9NXN4 497 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 AJAP1Q9UKB5 411 aaPredicted RBP20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 MGEA5O60502 916 aa20.37■□□□□ 0.85
TSPAN4-204ENST00000397404 NBNO60934 754 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms