RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SPATA1Q5VX52 437 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 RESP18Q5W5W9 173 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 TPGS2Q68CL5 300 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 SLC39A4Q6P5W5 647 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 SHC4Q6S5L8 630 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 CD300LGQ6UXG3 332 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 C3orf58Q8NDZ4 430 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 ZNF461Q8TAF7 563 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 FOXD4L4Q8WXT5 416 aaPredicted RBP15.14■□□□□ 0.01
SEC13-204ENST00000397099 SMG7Q92540 1137 aaKnown RBP15.14■□□□□ 0.01
SEC13-204ENST00000397099 NXPE3Q969Y0 559 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 C18orf25Q96B23 403 aaPredicted RBP15.14■□□□□ 0.01
SEC13-204ENST00000397099 DHX58Q96C10 678 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 C7orf25Q9BPX7 421 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 TRIM9Q9C026 710 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 KCNH6Q9H252 994 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 USP25Q9UHP3 1055 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 PCDHB8Q9UN66 801 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 SORCS3Q9UPU3 1222 aa15.14■□□□□ 0.01
SEC13-204ENST00000397099 M0QZQ0 153 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 POLR2DO15514 142 aaKnown RBP15.13■□□□□ 0.01
SEC13-204ENST00000397099 MYL1P05976 194 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 TKTP29401 623 aaKnown RBP15.13■□□□□ 0.01
SEC13-204ENST00000397099 OR1D2P34982 312 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 TNFSF9P41273 254 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 AARSP49588 968 aaKnown RBP eCLIP15.13■□□□□ 0.01
SEC13-204ENST00000397099 SNRPFP62306 86 aaKnown RBP15.13■□□□□ 0.01
SEC13-204ENST00000397099 DNM1Q05193 864 aaKnown RBP15.13■□□□□ 0.01
SEC13-204ENST00000397099 MRPL58Q14197 206 aaKnown RBP15.13■□□□□ 0.01
SEC13-204ENST00000397099 TMEM132DQ14C87 1099 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 SEZ6Q53EL9 994 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 PPM1LQ5SGD2 360 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 ZNF280DQ6N043 979 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 GLYCTKQ8IVS8 523 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 CEP57L1Q8IYX8 460 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 FBXL6Q8N531 539 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 SCAND2PQ9GZW5 306 aaPredicted RBP15.13■□□□□ 0.01
SEC13-204ENST00000397099 LIMD1Q9UGP4 676 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 PCDHA7Q9UN72 937 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 CDY1Q9Y6F8 540 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 CLUHO75153 1309 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 UBE4BO95155 1302 aa15.13■□□□□ 0.01
SEC13-204ENST00000397099 ANK1P16157 1881 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 MYO10Q9HD67 2058 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 PVALEFA0A1B0GWK0 134 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 ANKRD63C9JTQ0 380 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 MEFVO15553 781 aaPredicted RBP15.12■□□□□ 0.01
SEC13-204ENST00000397099 ASGR2P07307 311 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 C8AP07357 584 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 SPATA31D3P0C874 917 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 RPL17P18621 184 aaKnown RBP15.12■□□□□ 0.01
SEC13-204ENST00000397099 ELF1P32519 619 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 BRCC3P46736 316 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 ASIC1P78348 528 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 SPATA31D4Q6ZUB0 917 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 USP37Q86T82 979 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 SPRYD3Q8NCJ5 442 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 FEZF2Q8TBJ5 459 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 ZNF707Q96C28 371 aaPredicted RBP15.12■□□□□ 0.01
SEC13-204ENST00000397099 ASIC4Q96FT7 647 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 KIAA1586Q9HCI6 787 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 IGSF9Q9P2J2 1179 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 TUBGCP4Q9UGJ1 667 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 DSEQ9UL01 958 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 KCNH3Q9ULD8 1083 aa15.12■□□□□ 0.01
SEC13-204ENST00000397099 TBC1D4O60343 1298 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 RFPL2O75678 378 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 ABLIM3O94929 683 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 OAZ2O95190 189 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 ATF2P15336 505 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 TYMPP19971 482 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 CMA1P23946 247 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 ADSSP30520 456 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 HOXD11P31277 338 aaPredicted RBP15.11■□□□□ 0.01
SEC13-204ENST00000397099 PNPLA4P41247 253 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 ACOT2P49753 483 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 NHLH1Q02575 133 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 YWHAHQ04917 246 aaPredicted RBP15.11■□□□□ 0.01
SEC13-204ENST00000397099 PKP1Q13835 747 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 SURF1Q15526 300 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 FOXD4L6Q3SYB3 417 aaPredicted RBP15.11■□□□□ 0.01
SEC13-204ENST00000397099 JADE1Q6IE81 842 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 FOXD4L3Q6VB84 417 aaPredicted RBP15.11■□□□□ 0.01
SEC13-204ENST00000397099 UNC13DQ70J99 1090 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 CACTINQ8WUQ7 758 aaKnown RBP15.11■□□□□ 0.01
SEC13-204ENST00000397099 FAM212AQ96EL1 285 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 SPATA32Q96LK8 384 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 TBC1D7Q9P0N9 293 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 CGNQ9P2M7 1197 aaKnown RBP15.11■□□□□ 0.01
SEC13-204ENST00000397099 EPS15L1Q9UBC2 864 aa15.11■□□□□ 0.01
SEC13-204ENST00000397099 WDFY4Q6ZS81 3184 aa15.1■□□□□ 0.01
SEC13-204ENST00000397099 TECTAO75443 2155 aa15.1■□□□□ 0.01
SEC13-204ENST00000397099 OR6C75A6NL08 312 aa15.1■□□□□ 0.01
SEC13-204ENST00000397099 I3L4J1 428 aa15.1■□□□□ 0.01
SEC13-204ENST00000397099 EXTL3O43909 919 aa15.1■□□□□ 0.01
SEC13-204ENST00000397099 SLFN14P0C7P3 912 aa15.1■□□□□ 0.01
SEC13-204ENST00000397099 ODC1P11926 461 aa15.1■□□□□ 0.01
SEC13-204ENST00000397099 LILRA4P59901 499 aa15.1■□□□□ 0.01
SEC13-204ENST00000397099 CTXN3Q4LDR2 81 aa15.1■□□□□ 0.01
SEC13-204ENST00000397099 IER5LQ5T953 404 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms