RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 DDI1Q8WTU0 396 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 RAB6BQ9NRW1 208 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 SUPT3HB4E1H0 165 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 ATP6V1B1P15313 513 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 ACADSP16219 412 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 CAPZA2P47755 286 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 BTBD8Q5XKL5 378 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 FOXP4Q8IVH2 680 aaPredicted RBP14.65□□□□□ -0.06
COL4A3-202ENST00000396578 CCDC60Q8IWA6 550 aaPredicted RBP14.65□□□□□ -0.06
COL4A3-202ENST00000396578 ST13P5Q8NFI4 369 aaPredicted RBP14.65□□□□□ -0.06
COL4A3-202ENST00000396578 HES6Q96HZ4 224 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 PKP3Q9Y446 797 aa14.65□□□□□ -0.06
COL4A3-202ENST00000396578 KYNUQ16719 465 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 LBHD1Q9BQE6 289 aaPredicted RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 LRRIQ3A6PVS8 624 aaPredicted RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 TEX33O43247 280 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 SPAG6O75602 509 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 IFNEQ86WN2 208 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 SHCBP1Q8NEM2 672 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 ASZ1Q8WWH4 475 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 SIKE1Q9BRV8 207 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 ZBED2Q9BTP6 218 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 FOXP3Q9BZS1 431 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 GEMIN8Q9NWZ8 242 aaKnown RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 RCAN1P53805 252 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 KDELC2Q7Z4H8 507 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 LXNQ9BS40 222 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 UVRAGQ9P2Y5 699 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 LIMA1Q9UHB6 759 aaKnown RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 NEDD4P46934 1319 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 TMEM191CA6NGB0 347 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 EIF2S1P05198 315 aaKnown RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 BAG6P46379 1132 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 KCNK10P57789 538 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 USP10Q14694 798 aaKnown RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 MAPRE1Q15691 268 aaKnown RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 SLC18A3Q16572 532 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 C3orf62Q6ZUJ4 267 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 WNK4Q96J92 1243 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 PLEKHA5Q9HAU0 1116 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 A8MXQ7 604 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 EVPLLA8MZ36 301 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 STK25O00506 426 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 NUP62P37198 522 aaPredicted RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 RASGRF1Q13972 1273 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 KRT35Q92764 455 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 AGAP3Q96P47 875 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 MANSC1Q9H8J5 431 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 AGO2Q9UKV8 859 aaKnown RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 DTNAQ9Y4J8 743 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 ATP7BP35670 1465 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 B2RBV5 119 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 MOCS2O96007 188 aaPredicted RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 PI16Q6UXB8 463 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 C18orf8Q96DM3 657 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 HIC2Q96JB3 615 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 PAPOLBQ9NRJ5 636 aaKnown RBP14.64□□□□□ -0.07
COL4A3-202ENST00000396578 CD274Q9NZQ7 290 aa14.64□□□□□ -0.07
COL4A3-202ENST00000396578 IGF2BP3O00425 579 aaKnown RBP eCLIP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 SULT1E1P49888 294 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 ATPAF2Q8N5M1 289 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 KLHL11Q9NVR0 708 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 MAGEA13PA6NCF6 341 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 SH3RF3Q8TEJ3 882 aaPredicted RBP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 ROPN1BQ9BZX4 212 aaPredicted RBP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 ROPN1Q9HAT0 212 aaPredicted RBP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 BARHL2Q9NY43 387 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 TK2O00142 265 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 KIF2BQ8N4N8 673 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 XPO6Q96QU8 1125 aaKnown RBP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 STK33Q9BYT3 514 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 LY9Q9HBG7 655 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 C4orf33Q8N1A6 199 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 SNX31Q8N9S9 440 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 RGL1Q9NZL6 768 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 TMEM120BA0PK00 339 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 TRIM66O15016 1216 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 BTKQ06187 659 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 RASGRP2Q7LDG7 609 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 RSPH1Q8WYR4 309 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 KIF12Q96FN5 646 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 TNIP3Q96KP6 325 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 RBBP8Q99708 897 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 EIF2AK1Q9BQI3 630 aaKnown RBP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 GINS4Q9BRT9 223 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 IL1RL2Q9HB29 575 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 GJB4Q9NTQ9 266 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 ADGRL2O95490 1459 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 ZNF608Q9ULD9 1512 aaPredicted RBP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 NAA30Q147X3 362 aaPredicted RBP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 TMED8Q6PL24 325 aaPredicted RBP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 EPS8L2Q9H6S3 715 aa14.63□□□□□ -0.07
COL4A3-202ENST00000396578 KRCC1Q9NPI7 259 aaPredicted RBP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 MAP3K20Q9NYL2 800 aaKnown RBP14.63□□□□□ -0.07
COL4A3-202ENST00000396578 GH2P01242 217 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 P4HBP07237 508 aaKnown RBP14.62□□□□□ -0.07
COL4A3-202ENST00000396578 KCNB1Q14721 858 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 ZCWPW2Q504Y3 356 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 ARMCX4Q5H9R4 360 aa14.62□□□□□ -0.07
COL4A3-202ENST00000396578 ZCWPW1Q9H0M4 648 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms