RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 NPTX2P47972 431 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 EPHA5P54756 1037 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 ZNF174Q15697 407 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 CTXN3Q4LDR2 81 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 MAP4K3Q8IVH8 894 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 ZNF687Q8N1G0 1237 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 KCTD17Q8N5Z5 321 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 C8orf76Q96K31 380 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 LLPHQ9BRT6 129 aaKnown RBP19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 GOLGA2P5Q9HBQ8 144 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 ZNF334Q9HCZ1 680 aaPredicted RBP19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 ARHGAP28Q9P2N2 729 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 FBXL5Q9UKA1 691 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 NOL7Q9UMY1 257 aaKnown RBP19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 KIAA1024Q9UPX6 916 aa19.16■□□□□ 0.66
EXOSC3-202ENST00000396521 IGFBP6P24592 240 aaPredicted RBP19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 MARCKSP29966 332 aaPredicted RBP19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 NEK4P51957 841 aa19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 ATXN1P54253 815 aaKnown RBP19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 ARPP19P56211 112 aa19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 PEX3P56589 373 aa19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 SOX4Q06945 474 aaPredicted RBP19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 PLD1Q13393 1074 aa19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 TTC38Q5R3I4 469 aa19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 LAIR1Q6GTX8 287 aa19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 MPZL3Q6UWV2 235 aa19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 FAM3CQ92520 227 aa19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 NTPCRQ9BSD7 190 aaKnown RBP19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 KMT5AQ9NQR1 393 aa19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 ASAH2Q9NR71 780 aa19.15■□□□□ 0.66
EXOSC3-202ENST00000396521 LAD1O00515 517 aa19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 ZNF263O14978 683 aa19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 LARGE1O95461 756 aa19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 PROZP22891 400 aa19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 CNR2P34972 360 aa19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 GNL2Q13823 731 aaKnown RBP19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 MFSD6LQ8IWD5 586 aa19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 ZMAT2Q96NC0 199 aaKnown RBP19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 PLEKHA5Q9HAU0 1116 aa19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 DDX19AQ9NUU7 478 aaKnown RBP19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 USP18Q9UMW8 372 aa19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 ACACBO00763 2458 aa19.14■□□□□ 0.65
EXOSC3-202ENST00000396521 CACNA1BQ00975 2339 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 SHISA7A6NL88 538 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 TOM1L1O75674 476 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 SEC24AO95486 1093 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 RETP07949 1114 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 GDI1P31150 447 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 CXCL12P48061 93 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 OSTNP61366 133 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 HMGN5P82970 282 aaKnown RBP19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 STRN3Q13033 797 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 TSSK4Q6SA08 328 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 CEP120Q8N960 986 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 IGSF22Q8N9C0 903 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 FBXO18Q8NFZ0 1043 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 TCEAL4Q96EI5 215 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 TARS2Q9BW92 718 aaKnown RBP19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 C8orf33Q9H7E9 229 aaPredicted RBP19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 LMAN1LQ9HAT1 526 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 NDRG2Q9UN36 371 aaKnown RBP19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 PCDHB8Q9UN66 801 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 PIAS3Q9Y6X2 628 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 VWA8A3KMH1 1905 aa19.13■□□□□ 0.65
EXOSC3-202ENST00000396521 NOTCH4Q99466 2003 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 TDGF1P13385 188 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 TGM1P22735 817 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 PAX3P23760 479 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 MCM4P33991 863 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 FOSBP53539 338 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 SMTNP53814 917 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 LRRC32Q14392 662 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 GRM2Q14416 872 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 ECM1Q16610 540 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 KYAT1Q16773 422 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 KRT79Q5XKE5 535 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 VITQ6UXI7 678 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 SPEM1Q8N4L4 309 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 SNX29Q8TEQ0 813 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 SPIRE2Q8WWL2 714 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 TBC1D32Q96NH3 1257 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 TSPAN18Q96SJ8 248 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 LIMCH1Q9UPQ0 1083 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 SPTBN2O15020 2390 aa19.12■□□□□ 0.65
EXOSC3-202ENST00000396521 OAZ2O95190 189 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 PAPSS2O95340 614 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 FGF19O95750 216 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 CPB1P15086 417 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 SCP2P22307 547 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 CCR2P41597 374 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 GUCY1B3Q02153 619 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 YWHAHQ04917 246 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 TWF1Q12792 350 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 POTEHQ6S545 545 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 ZPBP2Q6X784 338 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 YAF2Q8IY57 180 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 C4orf32Q8N8J7 132 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 BEST2Q8NFU1 509 aa19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 ZSCAN18Q8TBC5 510 aaPredicted RBP19.11■□□□□ 0.65
EXOSC3-202ENST00000396521 NETO1Q8TDF5 533 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms