RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 FAM187BQ17R55 369 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 FAM110CQ1W6H9 321 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 LIN9Q5TKA1 542 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 MON1BQ7L1V2 547 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 IFNLR1Q8IU57 520 aaPredicted RBP15.97■□□□□ 0.15
CBX3-202ENST00000396386 THNSL1Q8IYQ7 743 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 CPA5Q8WXQ8 436 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 ANKRD36BP1Q96IX9 119 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 MAML3Q96JK9 1138 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 MINDY3Q9H8M7 445 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 ANAPC7Q9UJX3 599 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 B4GALT4O60513 344 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 MAPK4P31152 587 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 PEX5P50542 639 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 SGSM1Q2NKQ1 1148 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 SMYD5Q6GMV2 418 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 PLEKHH3Q7Z736 793 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 EFCAB13Q8IY85 973 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 RPF1Q9H9Y2 349 aaKnown RBP15.97■□□□□ 0.15
CBX3-202ENST00000396386 IFT122Q9HBG6 1241 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 AMACRQ9UHK6 382 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 AKT3Q9Y243 479 aa15.97■□□□□ 0.15
CBX3-202ENST00000396386 RALGAPA2Q2PPJ7 1873 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.96■□□□□ 0.15
CBX3-202ENST00000396386 HSF2BPO75031 334 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 RNF40O75150 1001 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 CELF2O95319 508 aaKnown RBP15.96■□□□□ 0.15
CBX3-202ENST00000396386 SYF2O95926 243 aaKnown RBP15.96■□□□□ 0.15
CBX3-202ENST00000396386 TMOD1P28289 359 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 GGCXP38435 758 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 HLTFQ14527 1009 aaKnown RBP eCLIP15.96■□□□□ 0.15
CBX3-202ENST00000396386 ZNF699Q32M78 642 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 PASD1Q8IV76 773 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 MREGQ8N565 214 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 TSEN2Q8NCE0 465 aaKnown RBP15.96■□□□□ 0.15
CBX3-202ENST00000396386 ZBTB9Q96C00 473 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 CYFIP2Q96F07 1278 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 RUFY1Q96T51 708 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 C16orf70Q9BSU1 422 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.96■□□□□ 0.15
CBX3-202ENST00000396386 PCDHA3Q9Y5H8 950 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 MROH7Q68CQ1 1323 aa15.96■□□□□ 0.15
CBX3-202ENST00000396386 TTI1O43156 1089 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 ZEB2O60315 1214 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 PPFIA4O75335 1185 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 CST3P01034 146 aaPredicted RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 FAM153BP0C7A2 387 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 MCF2P10911 925 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 RRM1P23921 792 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 OSTNP61366 133 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 TNFAIP2Q03169 654 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 FAM153CQ494X1 144 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 DUSP28Q4G0W2 176 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 ALS2CLQ60I27 953 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 ZNF771Q7L3S4 317 aaPredicted RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 CDR2LQ86X02 465 aaPredicted RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 PHF13Q86YI8 300 aaPredicted RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 CEP120Q8N960 986 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 OR6J1Q8NGC5 347 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 C11orf70Q9BRQ4 267 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 RAB17Q9H0T7 212 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 ERVK-5Q9HDB9 667 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 FAM153AQ9UHL3 310 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 ZHX1Q9UKY1 873 aaPredicted RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 TRPM7Q96QT4 1865 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 A0A087WZ62 844 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 H3BRB1 525 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 AGPSO00116 658 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 PHF2O75151 1096 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 MMP3P08254 477 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 CXCL8P10145 99 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 HOXD8P13378 290 aaPredicted RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 GUCY2FP51841 1108 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 RWDD2BP57060 319 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 YWHAEP62258 255 aaKnown RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 POU5F1Q01860 360 aaKnown RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 C1QBPQ07021 282 aaKnown RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 DHX34Q14147 1143 aaKnown RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 AMHR2Q16671 573 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 AADACL2Q6P093 401 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 MTHFD1LQ6UB35 978 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 ADAT2Q7Z6V5 191 aaKnown RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 CPNE8Q86YQ8 564 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 EXOC4Q96A65 974 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 VCPIP1Q96JH7 1222 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 FDXACB1Q9BRP7 624 aaPredicted RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 TINF2Q9BSI4 451 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 PLVAPQ9BX97 442 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 ABHD16BQ9H3Z7 469 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 TUT1Q9H6E5 874 aaKnown RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 UTP11Q9Y3A2 253 aaKnown RBP15.95■□□□□ 0.14
CBX3-202ENST00000396386 NR2E1Q9Y466 385 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 SCINQ9Y6U3 715 aa15.95■□□□□ 0.14
CBX3-202ENST00000396386 FAM187AA6NFU0 413 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 SLC15A5A6NIM6 579 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 CFHP08603 1231 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 IQCF3P0C7M6 154 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 SMPD1P17405 629 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 CD58P19256 250 aa15.94■□□□□ 0.14
CBX3-202ENST00000396386 SLC1A1P43005 524 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms