RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 RPUSD2Q8IZ73 545 aaKnown RBP12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 SLC20A1Q8WUM9 679 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 SNX27Q96L92 541 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 ALS2CR12Q96Q35 445 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 PCDHB18PQ96TA0 734 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 ARID3AQ99856 593 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 PACSIN1Q9BY11 444 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 BCO2Q9BYV7 579 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 CYP3A43Q9HB55 503 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 CNTN3Q9P232 1028 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 GINS2Q9Y248 185 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 NOC2LQ9Y3T9 749 aaKnown RBP12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 CDY2AQ9Y6F7 541 aa12.75□□□□□ -0.37
GTF2A2-202ENST00000396060 CHRNA1P02708 482 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 KCNE1P15382 129 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 USP8P40818 1118 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 RBP5P82980 135 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 ITGA7Q13683 1181 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 TRIM71Q2Q1W2 868 aaKnown RBP12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 SCARA3Q6AZY7 606 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 PPP1R2P3Q6NXS1 205 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 TRIM72Q6ZMU5 477 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 FAM43BQ6ZT52 329 aaPredicted RBP12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 FAM228AQ86W67 206 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 TTC39CQ8N584 583 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 ARRDC4Q8NCT1 418 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 TRAIPQ9BWF2 469 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 EIF2AQ9BY44 585 aaKnown RBP12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 SNTG2Q9NY99 539 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 RALGAPA2Q2PPJ7 1873 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 UMODL1Q5DID0 1318 aa12.74□□□□□ -0.37
GTF2A2-202ENST00000396060 MTA2O94776 668 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 MOCS3O95396 460 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 CYP1A1P04798 512 aaPredicted RBP12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 KRT5P13647 590 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 CYP3A5P20815 502 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 ASPAP45381 313 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 YARSP54577 528 aaKnown RBP12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 PTGISQ16647 500 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 WHAMMP3Q1A5X7 153 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 ZNF699Q32M78 642 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 SLFN11Q7Z7L1 901 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 PALB2Q86YC2 1186 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 WNT8BQ93098 351 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 DPP3Q9NY33 737 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 PHF24Q9UPV7 400 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 PIN4Q9Y237 131 aaKnown RBP12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 PCDHB4Q9Y5E5 795 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 CAPN6Q9Y6Q1 641 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 UQCRHLA0A096LP55 91 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 GPR182O15218 404 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 RPS6KA5O75582 802 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 UQCRHP07919 91 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 MMEP08473 750 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 UNGP13051 313 aaPredicted RBP12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 TUBB4BP68371 445 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 CLEC16AQ2KHT3 1053 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 FAM47CQ5HY64 1035 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 ZNF667Q5HYK9 610 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 ACAD10Q6JQN1 1059 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 LRRC57Q8N9N7 239 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 USP38Q8NB14 1042 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 RBBP8NLQ8NC74 664 aaPredicted RBP12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 CTNNBL1Q8WYA6 563 aaPredicted RBP12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 RFFLQ8WZ73 363 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 GLT1D1Q96MS3 346 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 CISHQ9NSE2 258 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 TAS2R14Q9NYV8 317 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 SAR1BQ9Y6B6 198 aa12.73□□□□□ -0.37
GTF2A2-202ENST00000396060 TULP1O00294 542 aaPredicted RBP12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 DYNC1I1O14576 645 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 ZNF623O75123 536 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 ATP1A1P05023 1023 aaKnown RBP12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 ITGB3P05106 788 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 P4HA1P13674 534 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 GPC5P78333 572 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 HTRA3P83110 453 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 TMEM270Q6UE05 265 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 MRPL10Q7Z7H8 261 aaKnown RBP12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 RHOT2Q8IXI1 618 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 LRRC52Q8N7C0 313 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 SMG8Q8ND04 991 aaKnown RBP12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 TPCN2Q8NHX9 752 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 ELMO3Q96BJ8 720 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 KIF12Q96FN5 646 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 VCPIP1Q96JH7 1222 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 ZMAT2Q96NC0 199 aaKnown RBP12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 TRIM6Q9C030 488 aaPredicted RBP12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 ERVK-5Q9HDB9 667 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 ACP6Q9NPH0 428 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 UBQLN1Q9UMX0 589 aaKnown RBP12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 ST3GAL5Q9UNP4 418 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 PTCH2Q9Y6C5 1203 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 TRIP11Q15643 1979 aa12.72□□□□□ -0.37
GTF2A2-202ENST00000396060 GRID2IPA4D2P6 1211 aa12.71□□□□□ -0.37
GTF2A2-202ENST00000396060 XPOTO43592 962 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms