RNA–Protein interactions for RNA: ENST00000396053.8

RBM4-202, Transcript of RNA binding motif protein 4, humanhuman

TSL 2 BASIC

Gene RBM4, Length 1,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-202ENST00000396053 TMEM191BP0C7N4 346 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 PRKCSHP14314 528 aaPredicted RBP13.63□□□□□ -0.23
RBM4-202ENST00000396053 OR1G1P47890 313 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 CLCNKBP51801 687 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 VAMP7P51809 220 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 TFAMQ00059 246 aaKnown RBP13.63□□□□□ -0.23
RBM4-202ENST00000396053 TFF2Q03403 129 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 ELAVL2Q12926 359 aaKnown RBP13.63□□□□□ -0.23
RBM4-202ENST00000396053 ZSCAN23Q3MJ62 389 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 DDX53Q86TM3 631 aaKnown RBP13.63□□□□□ -0.23
RBM4-202ENST00000396053 GPR65Q8IYL9 337 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 RNF168Q8IYW5 571 aaPredicted RBP13.63□□□□□ -0.23
RBM4-202ENST00000396053 KLHL23Q8NBE8 558 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 ENOX1Q8TC92 643 aaKnown RBP13.63□□□□□ -0.23
RBM4-202ENST00000396053 ARNTL2Q8WYA1 636 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 C18orf25Q96B23 403 aaPredicted RBP13.63□□□□□ -0.23
RBM4-202ENST00000396053 CCDC127Q96BQ5 260 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 ANKRD36BP1Q96IX9 119 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 BPIFA3Q9BQP9 254 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 PAAF1Q9BRP4 392 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 DPP3Q9NY33 737 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 LMCD1Q9NZU5 365 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 ARMCX3Q9UH62 379 aaPredicted RBP13.63□□□□□ -0.23
RBM4-202ENST00000396053 ADAM28Q9UKQ2 775 aa13.63□□□□□ -0.23
RBM4-202ENST00000396053 PLXNA4Q9HCM2 1894 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 SYCE3A1L190 88 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 LRRIQ3A6PVS8 624 aaPredicted RBP13.62□□□□□ -0.23
RBM4-202ENST00000396053 PODXLO00592 558 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 PIRO00625 290 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 TRAPPC3O43617 180 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 STX10O60499 249 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 B3GAT3O94766 335 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 KIF4AO95239 1232 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 TNNC2P02585 160 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 ITGB1P05556 798 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 DLATP10515 647 aaKnown RBP13.62□□□□□ -0.23
RBM4-202ENST00000396053 TNNI1P19237 187 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 POU3F3P20264 500 aaPredicted RBP13.62□□□□□ -0.23
RBM4-202ENST00000396053 GTF2H1P32780 548 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 PBX3P40426 434 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 PNPLA4P41247 253 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 STX17P56962 302 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 SPAG1Q07617 926 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 PDE12Q6L8Q7 609 aaKnown RBP13.62□□□□□ -0.23
RBM4-202ENST00000396053 SPRED2Q7Z698 418 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 TMEM173Q86WV6 379 aaPredicted RBP13.62□□□□□ -0.23
RBM4-202ENST00000396053 LRRC52Q8N7C0 313 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 CXorf38Q8TB03 319 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 PLEKHO2Q8TD55 490 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 SRRTQ9BXP5 876 aaKnown RBP13.62□□□□□ -0.23
RBM4-202ENST00000396053 MTMR12Q9C0I1 747 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 THAP9Q9H5L6 903 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 GOLGA2P5Q9HBQ8 144 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 PUF60Q9UHX1 559 aaKnown RBP13.62□□□□□ -0.23
RBM4-202ENST00000396053 MTUS1Q9ULD2 1270 aa13.62□□□□□ -0.23
RBM4-202ENST00000396053 PRG3Q9Y2Y8 225 aaPredicted RBP13.62□□□□□ -0.23
RBM4-202ENST00000396053 SF3B1O75533 1304 aaKnown RBP eCLIP13.61□□□□□ -0.233e-6■■■■■ 99.6
RBM4-202ENST00000396053 PTPRJQ12913 1337 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 BRWD1Q9NSI6 2320 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 IGFBP4P22692 258 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 AARSP49588 968 aaKnown RBP eCLIP13.61□□□□□ -0.23
RBM4-202ENST00000396053 KCNQ1P51787 676 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 GPM6BQ13491 265 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 C9orf57Q5W0N0 161 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 C15orf39Q6ZRI6 1047 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 C11orf57Q6ZUT1 292 aaPredicted RBP13.61□□□□□ -0.23
RBM4-202ENST00000396053 FAM114A1Q8IWE2 563 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 C1orf127Q8N9H9 656 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 C3orf58Q8NDZ4 430 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 OR5B17Q8NGF7 314 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 SPPL3Q8TCT6 385 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 KHSRPQ92945 711 aaKnown RBP eCLIP13.61□□□□□ -0.235e-6■■■□□ 15.9
RBM4-202ENST00000396053 EEF2KMTQ96G04 330 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 ZNF560Q96MR9 790 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 EPHX3Q9H6B9 360 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 IRAK3Q9Y616 596 aa13.61□□□□□ -0.23
RBM4-202ENST00000396053 NT5C1B-RDH14C9J2C7 533 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 LPXNO60711 386 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 TADA2AO75478 443 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 STAU1O95793 577 aaKnown RBP13.6□□□□□ -0.23
RBM4-202ENST00000396053 C4BPAP04003 597 aaKnown RBP13.6□□□□□ -0.23
RBM4-202ENST00000396053 SOD2P04179 222 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 ITGB3P05106 788 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 DLG4P78352 724 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 RBP5P82980 135 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 MYL5Q02045 173 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 PTPROQ16827 1216 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
RBM4-202ENST00000396053 ZACNQ401N2 412 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 CCDC40Q4G0X9 1142 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 ANO6Q4KMQ2 910 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 C1orf220Q5T0J3 134 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 FUT10Q6P4F1 479 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 TRAPPC11Q7Z392 1133 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 TRIM59Q8IWR1 403 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 BCL7CQ8WUZ0 217 aaPredicted RBP13.6□□□□□ -0.23
RBM4-202ENST00000396053 ZNF516Q92618 1163 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 SLC35C1Q96A29 364 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 LRFN3Q9BTN0 628 aa13.6□□□□□ -0.23
RBM4-202ENST00000396053 DNAJC25Q9H1X3 360 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms