RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 MEIS3P2A8K0S8 358 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 EVI5O60447 810 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 RBP5P82980 135 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 CUL2Q13617 745 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 RNF169Q8NCN4 708 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 CXorf38Q8TB03 319 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 RPS6KC1Q96S38 1066 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 XYLT2Q9H1B5 865 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 HAUS4Q9H6D7 363 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 TUBGCP4Q9UGJ1 667 aa21.94■■□□□ 1.1
VCPKMT-202ENST00000395860 TDRD15B5MCY1 1934 aaKnown RBP21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 SSU72P8A0A1W2PR75 194 aa21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 NDUFA10O95299 355 aa21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 ATICP31939 592 aa21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 PRKCIP41743 596 aa21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 MAPK8IP2Q13387 824 aaPredicted RBP21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 LRRC26Q2I0M4 334 aa21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 AGMOQ6ZNB7 445 aa21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 C18orf25Q96B23 403 aaPredicted RBP21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 ARID3AQ99856 593 aa21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 DESI2Q9BSY9 194 aa21.93■■□□□ 1.1
VCPKMT-202ENST00000395860 PARNO95453 639 aaKnown RBP21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 MLH1P40692 756 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 CCL23P55773 120 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 GPNMBQ14956 572 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 PLEKHG4Q58EX7 1191 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 ZNF667Q5HYK9 610 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 ECHDC2Q86YB7 292 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 SEPT8Q92599 483 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 JAKMIP2Q96AA8 810 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 SCLYQ96I15 445 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 ZFP42Q96MM3 310 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 GAD1Q99259 594 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 NIF3L1Q9GZT8 377 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 TMEM39AQ9NV64 488 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 PTGESO14684 152 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 AKR1B10O60218 316 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 OFD1O75665 1012 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 CLTBP09497 229 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 ATF7P17544 494 aaPredicted RBP21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 CYP2C18P33260 490 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 SLC24A5Q71RS6 500 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 RTN4RL1Q86UN2 441 aaPredicted RBP21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 FAM71AQ8IYT1 594 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 CCAR2Q8N163 923 aaKnown RBP21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 DBF4BQ8NFT6 615 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 HPDLQ96IR7 371 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 WNT8AQ9H1J5 351 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 RSAD1Q9HA92 442 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 TRMT1Q9NXH9 659 aaKnown RBP21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 TBX21Q9UL17 535 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 PPP2R2CQ9Y2T4 447 aa21.92■■□□□ 1.1
VCPKMT-202ENST00000395860 KIAA0100Q14667 2235 aaKnown RBP21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 C9IYK1 514 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 CCP110O43303 1012 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 IPO7O95373 1038 aaKnown RBP21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 CCDC175P0C221 793 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 KRT5P13647 590 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 KIF11P52732 1056 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 PTK2Q05397 1052 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 WDR72Q3MJ13 1102 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 LINC01599Q8WXQ3 324 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 APBB2Q92870 758 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 TSPYL2Q9H2G4 693 aaPredicted RBP21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 UBN1Q9NPG3 1134 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 NXF1Q9UBU9 619 aaKnown RBP21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 ADGRG1Q9Y653 693 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 SCN1AP35498 2009 aa21.91■■□□□ 1.1
VCPKMT-202ENST00000395860 ARL5CA6NH57 179 aa21.9■■□□□ 1.1
VCPKMT-202ENST00000395860 ZSCAN12O43309 604 aa21.9■■□□□ 1.1
VCPKMT-202ENST00000395860 CYP3A5P20815 502 aa21.9■■□□□ 1.1
VCPKMT-202ENST00000395860 MYO1EQ12965 1108 aa21.9■■□□□ 1.1
VCPKMT-202ENST00000395860 ACRBPQ8NEB7 543 aa21.9■■□□□ 1.1
VCPKMT-202ENST00000395860 PPP1R10Q96QC0 940 aaKnown RBP21.9■■□□□ 1.1
VCPKMT-202ENST00000395860 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.9■■□□□ 1.1
VCPKMT-202ENST00000395860 VRTNQ9H8Y1 702 aa21.9■■□□□ 1.1
VCPKMT-202ENST00000395860 SPTLC3Q9NUV7 552 aa21.9■■□□□ 1.1
VCPKMT-202ENST00000395860 SLC38A7Q9NVC3 462 aa21.9■■□□□ 1.1
VCPKMT-202ENST00000395860 USP27XA6NNY8 438 aa21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 EIF3CLB5ME19 914 aaKnown RBP21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 CYP26A1O43174 497 aa21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 THP07101 528 aa21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 C9orf57Q5W0N0 161 aa21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 SCARA5Q6ZMJ2 495 aa21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 FAM43BQ6ZT52 329 aaPredicted RBP21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 ZNF571Q7Z3V5 609 aaPredicted RBP21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 VPS36Q86VN1 386 aa21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 GSTCDQ8NEC7 633 aa21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 EIF3CQ99613 913 aaKnown RBP21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 KCND1Q9NSA2 647 aa21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 POLIQ9UNA4 740 aa21.89■■□□□ 1.1
VCPKMT-202ENST00000395860 TET1Q8NFU7 2136 aa21.89■■□□□ 1.09
VCPKMT-202ENST00000395860 ZNF500O60304 480 aaPredicted RBP21.89■■□□□ 1.09
VCPKMT-202ENST00000395860 STAU1O95793 577 aaKnown RBP21.89■■□□□ 1.09
VCPKMT-202ENST00000395860 EOMESO95936 686 aa21.89■■□□□ 1.09
VCPKMT-202ENST00000395860 P4HA1P13674 534 aa21.89■■□□□ 1.09
VCPKMT-202ENST00000395860 ASPAP45381 313 aa21.89■■□□□ 1.09
VCPKMT-202ENST00000395860 SPA17Q15506 151 aa21.89■■□□□ 1.09
VCPKMT-202ENST00000395860 ASTE1Q2TB18 679 aaPredicted RBP21.89■■□□□ 1.09
VCPKMT-202ENST00000395860 ZNF598Q86UK7 904 aaKnown RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms